Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC13.08□□□□□ -0.32
CXCR4P61073 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CXCR4P61073 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CXCR4P61073 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CXCR4P61073 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CXCR4P61073 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CXCR4P61073 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCR4P61073 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCR4P61073 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCR4P61073 KRT8P28-201ENST00000433288 1390 ntBASIC13.07□□□□□ -0.32
CXCR4P61073 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCR4P61073 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CXCR4P61073 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.07□□□□□ -0.32
CXCR4P61073 AC104758.3-203ENST00000562938 2123 ntBASIC13.07□□□□□ -0.32
CXCR4P61073 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC13.07□□□□□ -0.32
CXCR4P61073 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCR4P61073 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CXCR4P61073 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CXCR4P61073 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CXCR4P61073 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCR4P61073 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
CXCR4P61073 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC13.07□□□□□ -0.32
CXCR4P61073 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCR4P61073 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCR4P61073 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CXCR4P61073 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.07□□□□□ -0.32
CXCR4P61073 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.07□□□□□ -0.32
CXCR4P61073 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.07□□□□□ -0.32
CXCR4P61073 KRT18P25-201ENST00000508931 1278 ntBASIC13.07□□□□□ -0.32
CXCR4P61073 AC093214.1-201ENST00000511688 1107 ntBASIC13.07□□□□□ -0.32
CXCR4P61073 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CXCR4P61073 AC092552.1-201ENST00000547243 906 ntBASIC13.07□□□□□ -0.32
CXCR4P61073 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.07□□□□□ -0.32
CXCR4P61073 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.07□□□□□ -0.32
CXCR4P61073 AC133539.2-201ENST00000604757 467 ntBASIC13.07□□□□□ -0.32
CXCR4P61073 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
CXCR4P61073 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.07□□□□□ -0.32
CXCR4P61073 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CXCR4P61073 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCR4P61073 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CXCR4P61073 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCR4P61073 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCR4P61073 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCR4P61073 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC13.07□□□□□ -0.32
CXCR4P61073 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CXCR4P61073 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.07□□□□□ -0.32
CXCR4P61073 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.07□□□□□ -0.32
CXCR4P61073 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.07□□□□□ -0.32
CXCR4P61073 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
CXCR4P61073 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCR4P61073 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.07□□□□□ -0.32
CXCR4P61073 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCR4P61073 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CXCR4P61073 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCR4P61073 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCR4P61073 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.06□□□□□ -0.32
CXCR4P61073 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCR4P61073 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCR4P61073 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CXCR4P61073 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CXCR4P61073 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCR4P61073 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCR4P61073 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.06□□□□□ -0.32
CXCR4P61073 LINC00567-201ENST00000569854 3409 ntBASIC13.06□□□□□ -0.32
CXCR4P61073 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC13.06□□□□□ -0.32
CXCR4P61073 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.06□□□□□ -0.32
CXCR4P61073 SALL4P6-201ENST00000429385 1691 ntBASIC13.06□□□□□ -0.32
CXCR4P61073 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CXCR4P61073 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCR4P61073 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCR4P61073 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CXCR4P61073 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCR4P61073 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCR4P61073 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCR4P61073 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCR4P61073 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.06□□□□□ -0.32
CXCR4P61073 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCR4P61073 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.06□□□□□ -0.32
CXCR4P61073 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.06□□□□□ -0.32
CXCR4P61073 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.06□□□□□ -0.32
CXCR4P61073 INE1-201ENST00000456273 945 ntBASIC13.06□□□□□ -0.32
CXCR4P61073 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.06□□□□□ -0.32
CXCR4P61073 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.06□□□□□ -0.32
CXCR4P61073 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
CXCR4P61073 AC123567.1-201ENST00000548294 1261 ntBASIC13.06□□□□□ -0.32
CXCR4P61073 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.06□□□□□ -0.32
CXCR4P61073 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.06□□□□□ -0.32
CXCR4P61073 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.06□□□□□ -0.32
CXCR4P61073 AC005252.2-201ENST00000624630 1141 ntBASIC13.06□□□□□ -0.32
CXCR4P61073 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.06□□□□□ -0.32
CXCR4P61073 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CXCR4P61073 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCR4P61073 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCR4P61073 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCR4P61073 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CXCR4P61073 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCR4P61073 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CXCR4P61073 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC13.06□□□□□ -0.32
CXCR4P61073 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CXCR4P61073 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms