Protein–RNA interactions for Protein: P49840

GSK3A, Glycogen synthase kinase-3 alpha, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3AP49840 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 SHC1P1-201ENST00000425230 1745 ntBASIC12.59□□□□□ -0.39
GSK3AP49840 AL023775.1-201ENST00000454907 1746 ntBASIC12.59□□□□□ -0.39
GSK3AP49840 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
GSK3AP49840 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.59□□□□□ -0.39
GSK3AP49840 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
GSK3AP49840 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
GSK3AP49840 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
GSK3AP49840 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.59□□□□□ -0.39
GSK3AP49840 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
GSK3AP49840 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
GSK3AP49840 AC010141.1-201ENST00000411585 623 ntBASIC12.59□□□□□ -0.39
GSK3AP49840 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.59□□□□□ -0.39
GSK3AP49840 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.59□□□□□ -0.39
GSK3AP49840 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC12.59□□□□□ -0.39
GSK3AP49840 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.59□□□□□ -0.39
GSK3AP49840 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.59□□□□□ -0.39
GSK3AP49840 AL161932.2-201ENST00000435436 679 ntBASIC12.59□□□□□ -0.39
GSK3AP49840 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.59□□□□□ -0.39
GSK3AP49840 CNN2P10-201ENST00000443067 918 ntBASIC12.59□□□□□ -0.39
GSK3AP49840 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.59□□□□□ -0.39
GSK3AP49840 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 HOMER2P2-201ENST00000451621 847 ntBASIC12.59□□□□□ -0.39
GSK3AP49840 KLF2P4-201ENST00000451959 1225 ntBASIC12.59□□□□□ -0.39
GSK3AP49840 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.59□□□□□ -0.39
GSK3AP49840 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.59□□□□□ -0.39
GSK3AP49840 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC12.59□□□□□ -0.39
GSK3AP49840 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.59□□□□□ -0.39
GSK3AP49840 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.59□□□□□ -0.39
GSK3AP49840 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.59□□□□□ -0.39
GSK3AP49840 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC12.59□□□□□ -0.39
GSK3AP49840 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.59□□□□□ -0.39
GSK3AP49840 LINC02084-201ENST00000606069 1096 ntBASIC12.59□□□□□ -0.39
GSK3AP49840 TCEAL4-213ENST00000613326 1166 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
GSK3AP49840 AL512356.3-201ENST00000623005 461 ntBASIC12.59□□□□□ -0.39
GSK3AP49840 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.59□□□□□ -0.39
GSK3AP49840 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.59□□□□□ -0.39
GSK3AP49840 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
GSK3AP49840 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 DMBT1P1-203ENST00000636837 4628 ntBASIC12.59□□□□□ -0.39
GSK3AP49840 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.59□□□□□ -0.39
GSK3AP49840 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.59□□□□□ -0.39
GSK3AP49840 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
GSK3AP49840 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.59□□□□□ -0.39
GSK3AP49840 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GSK3AP49840 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
GSK3AP49840 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.39
GSK3AP49840 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.39
GSK3AP49840 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
GSK3AP49840 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GSK3AP49840 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GSK3AP49840 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.58□□□□□ -0.4
GSK3AP49840 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GSK3AP49840 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
GSK3AP49840 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.58□□□□□ -0.4
GSK3AP49840 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GSK3AP49840 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.58□□□□□ -0.4
GSK3AP49840 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
GSK3AP49840 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
GSK3AP49840 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GSK3AP49840 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GSK3AP49840 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
GSK3AP49840 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
GSK3AP49840 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
GSK3AP49840 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GSK3AP49840 MIR326-201ENST00000362220 95 ntBASIC12.58□□□□□ -0.4
GSK3AP49840 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GSK3AP49840 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GSK3AP49840 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GSK3AP49840 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms