Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
FDFT1P37268 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.62□□□□□ -0.07
FDFT1P37268 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.62□□□□□ -0.07
FDFT1P37268 AL160314.3-201ENST00000556041 767 ntBASIC14.62□□□□□ -0.07
FDFT1P37268 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.62□□□□□ -0.07
FDFT1P37268 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.62□□□□□ -0.07
FDFT1P37268 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.62□□□□□ -0.07
FDFT1P37268 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
FDFT1P37268 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.62□□□□□ -0.07
FDFT1P37268 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FDFT1P37268 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.62□□□□□ -0.07
FDFT1P37268 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
FDFT1P37268 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.62□□□□□ -0.07
FDFT1P37268 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.62□□□□□ -0.07
FDFT1P37268 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
FDFT1P37268 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FDFT1P37268 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
FDFT1P37268 AL590824.1-201ENST00000403828 1349 ntBASIC14.62□□□□□ -0.07
FDFT1P37268 AHCYP4-201ENST00000419201 1315 ntBASIC14.62□□□□□ -0.07
FDFT1P37268 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FDFT1P37268 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
FDFT1P37268 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
FDFT1P37268 NCLP1-201ENST00000445357 1963 ntBASIC14.62□□□□□ -0.07
FDFT1P37268 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.62□□□□□ -0.07
FDFT1P37268 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
FDFT1P37268 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.61□□□□□ -0.07
FDFT1P37268 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.61□□□□□ -0.07
FDFT1P37268 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
FDFT1P37268 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
FDFT1P37268 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
FDFT1P37268 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
FDFT1P37268 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
FDFT1P37268 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.61□□□□□ -0.07
FDFT1P37268 GAPDHP21-201ENST00000450301 1010 ntBASIC14.61□□□□□ -0.07
FDFT1P37268 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
FDFT1P37268 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.61□□□□□ -0.07
FDFT1P37268 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.61□□□□□ -0.07
FDFT1P37268 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.61□□□□□ -0.07
FDFT1P37268 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.61□□□□□ -0.07
FDFT1P37268 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
FDFT1P37268 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.61□□□□□ -0.07
FDFT1P37268 PGAM1P5-201ENST00000548011 764 ntBASIC14.61□□□□□ -0.07
FDFT1P37268 DUX4L45-201ENST00000566406 1057 ntBASIC14.61□□□□□ -0.07
FDFT1P37268 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.61□□□□□ -0.07
FDFT1P37268 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.61□□□□□ -0.07
FDFT1P37268 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.61□□□□□ -0.07
FDFT1P37268 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.61□□□□□ -0.07
FDFT1P37268 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.61□□□□□ -0.07
FDFT1P37268 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
FDFT1P37268 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
FDFT1P37268 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
FDFT1P37268 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.61□□□□□ -0.07
FDFT1P37268 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
FDFT1P37268 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FDFT1P37268 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FDFT1P37268 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.6□□□□□ -0.07
FDFT1P37268 CYP4F23P-201ENST00000593402 1579 ntBASIC14.6□□□□□ -0.07
FDFT1P37268 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FDFT1P37268 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FDFT1P37268 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FDFT1P37268 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.6□□□□□ -0.07
FDFT1P37268 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
FDFT1P37268 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.6□□□□□ -0.07
FDFT1P37268 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FDFT1P37268 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
FDFT1P37268 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.6□□□□□ -0.07
FDFT1P37268 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.6□□□□□ -0.07
FDFT1P37268 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FDFT1P37268 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FDFT1P37268 AC103592.1-201ENST00000394513 664 ntBASIC14.6□□□□□ -0.07
FDFT1P37268 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
FDFT1P37268 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.6□□□□□ -0.07
FDFT1P37268 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms