Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC10.58□□□□□ -0.72
CKS2P33552 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 CSPG4P13-202ENST00000567704 4801 ntBASIC10.58□□□□□ -0.72
CKS2P33552 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC10.58□□□□□ -0.72
CKS2P33552 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC10.57□□□□□ -0.72
CKS2P33552 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 GOLGA8EP-201ENST00000530246 1959 ntBASIC10.57□□□□□ -0.72
CKS2P33552 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
CKS2P33552 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
CKS2P33552 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC10.57□□□□□ -0.72
CKS2P33552 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
CKS2P33552 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
CKS2P33552 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
CKS2P33552 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC10.57□□□□□ -0.72
CKS2P33552 SERF2-209ENST00000409646 559 ntTSL 4 BASIC10.57□□□□□ -0.72
CKS2P33552 MKNK2P1-201ENST00000437526 628 ntBASIC10.57□□□□□ -0.72
CKS2P33552 AK2P2-201ENST00000439142 405 ntBASIC10.57□□□□□ -0.72
CKS2P33552 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC10.57□□□□□ -0.72
CKS2P33552 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 SLBP-205ENST00000488267 987 ntTSL 2 BASIC10.57□□□□□ -0.72
CKS2P33552 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC10.57□□□□□ -0.72
CKS2P33552 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC10.57□□□□□ -0.72
CKS2P33552 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC10.57□□□□□ -0.72
CKS2P33552 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC10.57□□□□□ -0.72
CKS2P33552 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC10.57□□□□□ -0.72
CKS2P33552 AL512361.1-201ENST00000554200 418 ntBASIC10.57□□□□□ -0.72
CKS2P33552 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC10.57□□□□□ -0.72
CKS2P33552 SLC25A6P4-201ENST00000586535 553 ntBASIC10.57□□□□□ -0.72
CKS2P33552 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC10.57□□□□□ -0.72
CKS2P33552 BX539320.1-201ENST00000623759 877 ntBASIC10.57□□□□□ -0.72
CKS2P33552 AC027369.3-201ENST00000530465 3707 ntBASIC10.57□□□□□ -0.72
CKS2P33552 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 AL359845.1-201ENST00000458202 1648 ntBASIC10.57□□□□□ -0.72
CKS2P33552 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC10.57□□□□□ -0.72
CKS2P33552 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC10.57□□□□□ -0.72
CKS2P33552 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC10.57□□□□□ -0.72
CKS2P33552 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
CKS2P33552 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
CKS2P33552 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
CKS2P33552 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC10.57□□□□□ -0.72
CKS2P33552 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC10.57□□□□□ -0.72
CKS2P33552 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CKS2P33552 AC064801.2-201ENST00000625052 1303 ntBASIC10.57□□□□□ -0.72
CKS2P33552 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS2P33552 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS2P33552 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
CKS2P33552 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS2P33552 DDC-214ENST00000622873 1839 ntTSL 3 BASIC10.56□□□□□ -0.72
CKS2P33552 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC10.56□□□□□ -0.72
CKS2P33552 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC10.56□□□□□ -0.72
CKS2P33552 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC10.56□□□□□ -0.72
CKS2P33552 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS2P33552 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC10.56□□□□□ -0.72
CKS2P33552 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS2P33552 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC10.56□□□□□ -0.72
CKS2P33552 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS2P33552 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC10.56□□□□□ -0.72
CKS2P33552 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS2P33552 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS2P33552 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CKS2P33552 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC10.56□□□□□ -0.72
CKS2P33552 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS2P33552 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC10.56□□□□□ -0.72
CKS2P33552 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS2P33552 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS2P33552 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC10.56□□□□□ -0.72
CKS2P33552 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS2P33552 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
CKS2P33552 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
CKS2P33552 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC10.56□□□□□ -0.72
CKS2P33552 AL627223.1-201ENST00000416693 442 ntBASIC10.56□□□□□ -0.72
CKS2P33552 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC10.56□□□□□ -0.72
CKS2P33552 MCCD1P2-201ENST00000423228 335 ntBASIC10.56□□□□□ -0.72
CKS2P33552 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC10.56□□□□□ -0.72
CKS2P33552 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC10.56□□□□□ -0.72
CKS2P33552 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms