Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
CLTAP09496 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLTAP09496 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLTAP09496 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLTAP09496 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.7■□□□□ 0.1
CLTAP09496 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLTAP09496 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CLTAP09496 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLTAP09496 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLTAP09496 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.69■□□□□ 0.1
CLTAP09496 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.69■□□□□ 0.1
CLTAP09496 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.69■□□□□ 0.1
CLTAP09496 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.69■□□□□ 0.1
CLTAP09496 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.69■□□□□ 0.1
CLTAP09496 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLTAP09496 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.69■□□□□ 0.1
CLTAP09496 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.69■□□□□ 0.1
CLTAP09496 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.69■□□□□ 0.1
CLTAP09496 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLTAP09496 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.69■□□□□ 0.1
CLTAP09496 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CLTAP09496 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.69■□□□□ 0.1
CLTAP09496 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.69■□□□□ 0.1
CLTAP09496 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.69■□□□□ 0.1
CLTAP09496 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.69■□□□□ 0.1
CLTAP09496 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.69■□□□□ 0.1
CLTAP09496 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CLTAP09496 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 AC140658.4-201ENST00000561990 352 ntBASIC15.69■□□□□ 0.1
CLTAP09496 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.69■□□□□ 0.1
CLTAP09496 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.69■□□□□ 0.1
CLTAP09496 CU633904.3-201ENST00000624042 1029 ntBASIC15.69■□□□□ 0.1
CLTAP09496 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.69■□□□□ 0.1
CLTAP09496 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.69■□□□□ 0.1
CLTAP09496 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.69■□□□□ 0.1
CLTAP09496 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.69■□□□□ 0.1
CLTAP09496 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLTAP09496 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.69■□□□□ 0.1
CLTAP09496 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.69■□□□□ 0.1
CLTAP09496 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CLTAP09496 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.69■□□□□ 0.1
CLTAP09496 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CLTAP09496 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLTAP09496 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.69■□□□□ 0.1
CLTAP09496 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.68■□□□□ 0.1
CLTAP09496 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLTAP09496 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CLTAP09496 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CLTAP09496 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLTAP09496 AP002353.1-201ENST00000528257 1599 ntBASIC15.68■□□□□ 0.1
CLTAP09496 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLTAP09496 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.68■□□□□ 0.1
CLTAP09496 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.68■□□□□ 0.1
CLTAP09496 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.68■□□□□ 0.1
CLTAP09496 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLTAP09496 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.68■□□□□ 0.1
CLTAP09496 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLTAP09496 AL133466.1-201ENST00000447582 150 ntBASIC15.68■□□□□ 0.1
CLTAP09496 AC012618.1-201ENST00000461223 412 ntBASIC15.68■□□□□ 0.1
CLTAP09496 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
CLTAP09496 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLTAP09496 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.68■□□□□ 0.1
CLTAP09496 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.68■□□□□ 0.1
CLTAP09496 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.68■□□□□ 0.1
CLTAP09496 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.68■□□□□ 0.1
CLTAP09496 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLTAP09496 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLTAP09496 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.68■□□□□ 0.1
CLTAP09496 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CLTAP09496 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLTAP09496 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.68■□□□□ 0.1
CLTAP09496 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLTAP09496 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CLTAP09496 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC15.68■□□□□ 0.1
CLTAP09496 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.68■□□□□ 0.1
CLTAP09496 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms