Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.27■□□□□ 0.04
O00370 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.27■□□□□ 0.04
O00370 MIR4525-201ENST00000580000 75 ntBASIC15.27■□□□□ 0.04
O00370 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
O00370 CCT8L1P-201ENST00000465400 1674 ntBASIC15.27■□□□□ 0.03
O00370 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
O00370 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.27■□□□□ 0.03
O00370 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
O00370 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
O00370 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
O00370 COL6A4P2-202ENST00000504443 2753 ntBASIC15.27■□□□□ 0.03
O00370 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
O00370 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
O00370 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.27■□□□□ 0.03
O00370 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
O00370 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
O00370 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
O00370 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
O00370 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
O00370 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
O00370 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
O00370 AC023794.5-201ENST00000564380 2157 ntBASIC15.26■□□□□ 0.03
O00370 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC15.26■□□□□ 0.03
O00370 AC087386.2-201ENST00000623212 4637 ntBASIC15.26■□□□□ 0.03
O00370 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
O00370 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.26■□□□□ 0.03
O00370 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
O00370 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.26■□□□□ 0.03
O00370 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 AC020907.1-201ENST00000616460 1350 ntBASIC15.26■□□□□ 0.03
O00370 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
O00370 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.26■□□□□ 0.03
O00370 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.26■□□□□ 0.03
O00370 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.26■□□□□ 0.03
O00370 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
O00370 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 USP17L6P-201ENST00000382470 1197 ntBASIC15.26■□□□□ 0.03
O00370 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.26■□□□□ 0.03
O00370 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
O00370 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.26■□□□□ 0.03
O00370 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 BX284668.4-201ENST00000453917 508 ntBASIC15.26■□□□□ 0.03
O00370 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.26■□□□□ 0.03
O00370 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 AC099548.2-209ENST00000480264 625 ntBASIC15.26■□□□□ 0.03
O00370 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
O00370 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.26■□□□□ 0.03
O00370 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
O00370 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.26■□□□□ 0.03
O00370 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.26■□□□□ 0.03
O00370 AC026740.1-201ENST00000607068 791 ntBASIC15.26■□□□□ 0.03
O00370 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
O00370 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 HADH-202ENST00000403312 1752 ntTSL 5 BASIC15.26■□□□□ 0.03
O00370 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.26■□□□□ 0.03
O00370 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.26■□□□□ 0.03
O00370 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
O00370 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
O00370 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
O00370 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
O00370 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.25■□□□□ 0.03
O00370 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC15.25■□□□□ 0.03
O00370 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
O00370 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.25■□□□□ 0.03
O00370 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
O00370 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
O00370 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
O00370 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
O00370 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
O00370 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.25■□□□□ 0.03
O00370 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
O00370 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
O00370 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
O00370 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
O00370 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
O00370 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms