Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
POLR1DQ9Y2S0 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
POLR1DQ9Y2S0 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
POLR1DQ9Y2S0 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
POLR1DQ9Y2S0 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.89□□□□□ -0.35
POLR1DQ9Y2S0 CICP4-201ENST00000447359 2812 ntBASIC12.89□□□□□ -0.35
POLR1DQ9Y2S0 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 CICP16-201ENST00000502609 2813 ntBASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 BOLA2P3-201ENST00000404566 256 ntBASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 CNN2P8-201ENST00000421872 913 ntBASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 NME2P1-201ENST00000426182 414 ntBASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 HOMER2P2-201ENST00000451621 847 ntBASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 CICP12-201ENST00000455801 843 ntBASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 AL358472.3-201ENST00000608147 415 ntBASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 AC012645.4-201ENST00000610691 1061 ntBASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 TUBB8P4-201ENST00000511806 1324 ntBASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 AC064801.2-201ENST00000625052 1303 ntBASIC12.88□□□□□ -0.35
POLR1DQ9Y2S0 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 MIR326-201ENST00000362220 95 ntBASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.87□□□□□ -0.35
POLR1DQ9Y2S0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms