Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 AC007274.2-201ENST00000421675 662 ntBASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 AC116345.2-201ENST00000512837 523 ntBASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 AC124068.2-201ENST00000569473 1109 ntBASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 AC012044.1-201ENST00000603431 297 ntBASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC17.02■□□□□ 0.31
CLIP2Q9UDT6 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC17.02■□□□□ 0.31
CLIP2Q9UDT6 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.02■□□□□ 0.31
CLIP2Q9UDT6 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLIP2Q9UDT6 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLIP2Q9UDT6 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CLIP2Q9UDT6 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC17.02■□□□□ 0.31
CLIP2Q9UDT6 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
CLIP2Q9UDT6 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC17.02■□□□□ 0.31
CLIP2Q9UDT6 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLIP2Q9UDT6 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CLIP2Q9UDT6 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC17.02■□□□□ 0.31
CLIP2Q9UDT6 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 AGGF1P1-201ENST00000509500 2073 ntBASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 LINC01165-201ENST00000445190 1623 ntBASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 AC091046.1-201ENST00000331871 207 ntBASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CLIP2Q9UDT6 AC215219.1-201ENST00000400706 1817 ntBASIC17■□□□□ 0.31
CLIP2Q9UDT6 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIP2Q9UDT6 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIP2Q9UDT6 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIP2Q9UDT6 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC17■□□□□ 0.31
CLIP2Q9UDT6 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIP2Q9UDT6 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CLIP2Q9UDT6 AC015909.3-201ENST00000572855 1794 ntBASIC17■□□□□ 0.31
CLIP2Q9UDT6 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLIP2Q9UDT6 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIP2Q9UDT6 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC17■□□□□ 0.31
CLIP2Q9UDT6 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC17■□□□□ 0.31
CLIP2Q9UDT6 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC17■□□□□ 0.31
CLIP2Q9UDT6 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLIP2Q9UDT6 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIP2Q9UDT6 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17■□□□□ 0.31
CLIP2Q9UDT6 TSPY25P-201ENST00000429463 745 ntBASIC17■□□□□ 0.31
CLIP2Q9UDT6 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC17■□□□□ 0.31
CLIP2Q9UDT6 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIP2Q9UDT6 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17■□□□□ 0.31
CLIP2Q9UDT6 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
CLIP2Q9UDT6 AC242376.1-201ENST00000559033 726 ntBASIC17■□□□□ 0.31
CLIP2Q9UDT6 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17■□□□□ 0.31
CLIP2Q9UDT6 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17■□□□□ 0.31
CLIP2Q9UDT6 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17■□□□□ 0.31
CLIP2Q9UDT6 MEG3_2.1-201ENST00000611456 105 ntBASIC17■□□□□ 0.31
CLIP2Q9UDT6 AC126335.2-201ENST00000623362 4637 ntBASIC17■□□□□ 0.31
CLIP2Q9UDT6 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CLIP2Q9UDT6 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIP2Q9UDT6 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIP2Q9UDT6 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CLIP2Q9UDT6 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CLIP2Q9UDT6 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CLIP2Q9UDT6 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CLIP2Q9UDT6 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIP2Q9UDT6 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms