Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 OR7E115P-201ENST00000382617 1024 ntBASIC14.16□□□□□ -0.14
NCDNQ9UBB6 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 RN7SL375P-201ENST00000492442 298 ntBASIC14.16□□□□□ -0.14
NCDNQ9UBB6 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 FOXN3-AS2-201ENST00000554071 1262 ntBASIC14.16□□□□□ -0.14
NCDNQ9UBB6 KRT8P2-201ENST00000556193 944 ntBASIC14.16□□□□□ -0.14
NCDNQ9UBB6 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NCDNQ9UBB6 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 AC023090.2-201ENST00000625182 2110 ntBASIC14.15□□□□□ -0.14
NCDNQ9UBB6 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 GRPEL2P1-201ENST00000453145 339 ntBASIC14.15□□□□□ -0.14
NCDNQ9UBB6 RPS23-207ENST00000511844 530 ntTSL 2 BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 COX5A-205ENST00000568517 582 ntTSL 3 BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 MIR4254-201ENST00000581063 76 ntBASIC14.15□□□□□ -0.14
NCDNQ9UBB6 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 AL133467.4-201ENST00000602953 725 ntBASIC14.15□□□□□ -0.14
NCDNQ9UBB6 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC14.15□□□□□ -0.14
NCDNQ9UBB6 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NCDNQ9UBB6 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC14.15□□□□□ -0.15
NCDNQ9UBB6 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC14.15□□□□□ -0.15
NCDNQ9UBB6 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NCDNQ9UBB6 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NCDNQ9UBB6 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NCDNQ9UBB6 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 350.2 ms