Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 AC132192.2-201ENST00000596206 1147 ntBASIC14.58□□□□□ -0.08
PHACTR1Q9C0D0 AL354718.3-201ENST00000616414 581 ntBASIC14.58□□□□□ -0.08
PHACTR1Q9C0D0 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PHACTR1Q9C0D0 CR382287.1-201ENST00000623954 586 ntBASIC14.58□□□□□ -0.08
PHACTR1Q9C0D0 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PHACTR1Q9C0D0 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.58□□□□□ -0.08
PHACTR1Q9C0D0 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.58□□□□□ -0.08
PHACTR1Q9C0D0 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
PHACTR1Q9C0D0 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PHACTR1Q9C0D0 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PHACTR1Q9C0D0 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PHACTR1Q9C0D0 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PHACTR1Q9C0D0 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PHACTR1Q9C0D0 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PHACTR1Q9C0D0 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PHACTR1Q9C0D0 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PHACTR1Q9C0D0 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.58□□□□□ -0.08
PHACTR1Q9C0D0 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PHACTR1Q9C0D0 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PHACTR1Q9C0D0 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.58□□□□□ -0.08
PHACTR1Q9C0D0 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 AC025183.3-201ENST00000623526 1482 ntBASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 POM121L14P-201ENST00000406100 1558 ntBASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 AP002761.4-201ENST00000565433 3361 ntBASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 MIR326-201ENST00000362220 95 ntBASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 AC092933.1-201ENST00000393644 945 ntBASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 SNORA50C-201ENST00000408535 133 ntBASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 HMGA1P1-201ENST00000415560 1062 ntBASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 AL157407.1-201ENST00000435784 904 ntBASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 COX5BP1-201ENST00000507622 393 ntBASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 SNORA50.1-201ENST00000628590 135 ntBASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 AL591163.1-201ENST00000641757 987 ntBASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 BEND3P3-201ENST00000611030 2440 ntBASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 AL008718.2-201ENST00000609206 1313 ntBASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
PHACTR1Q9C0D0 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms