Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC10.95□□□□□ -0.66
VGLL1Q99990 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VGLL1Q99990 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC10.95□□□□□ -0.66
VGLL1Q99990 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC10.95□□□□□ -0.66
VGLL1Q99990 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
VGLL1Q99990 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
VGLL1Q99990 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
VGLL1Q99990 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC10.94□□□□□ -0.66
VGLL1Q99990 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
VGLL1Q99990 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC10.94□□□□□ -0.66
VGLL1Q99990 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC10.94□□□□□ -0.66
VGLL1Q99990 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
VGLL1Q99990 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 KRT8P28-201ENST00000433288 1390 ntBASIC10.94□□□□□ -0.66
VGLL1Q99990 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 AC019294.4-201ENST00000561777 2905 ntBASIC10.94□□□□□ -0.66
VGLL1Q99990 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC10.94□□□□□ -0.66
VGLL1Q99990 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
VGLL1Q99990 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
VGLL1Q99990 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
VGLL1Q99990 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
VGLL1Q99990 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC10.94□□□□□ -0.66
VGLL1Q99990 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
VGLL1Q99990 ARSEP1-201ENST00000420443 635 ntBASIC10.94□□□□□ -0.66
VGLL1Q99990 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC10.94□□□□□ -0.66
VGLL1Q99990 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC10.94□□□□□ -0.66
VGLL1Q99990 AC027237.1-201ENST00000560942 655 ntBASIC10.94□□□□□ -0.66
VGLL1Q99990 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC10.94□□□□□ -0.66
VGLL1Q99990 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC10.94□□□□□ -0.66
VGLL1Q99990 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
VGLL1Q99990 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC10.94□□□□□ -0.66
VGLL1Q99990 ABBA01031660.1-201ENST00000635219 756 ntBASIC10.94□□□□□ -0.66
VGLL1Q99990 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC10.94□□□□□ -0.66
VGLL1Q99990 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 TNN-202ENST00000621086 4234 ntTSL 5 BASIC10.94□□□□□ -0.66
VGLL1Q99990 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
VGLL1Q99990 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC10.94□□□□□ -0.66
VGLL1Q99990 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
VGLL1Q99990 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC10.94□□□□□ -0.66
VGLL1Q99990 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 AC068760.1-201ENST00000493579 1953 ntBASIC10.94□□□□□ -0.66
VGLL1Q99990 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VGLL1Q99990 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC10.93□□□□□ -0.66
VGLL1Q99990 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC10.93□□□□□ -0.66
VGLL1Q99990 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
VGLL1Q99990 AP000593.2-201ENST00000542775 1433 ntBASIC10.93□□□□□ -0.66
VGLL1Q99990 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
VGLL1Q99990 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
VGLL1Q99990 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
VGLL1Q99990 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC10.93□□□□□ -0.66
VGLL1Q99990 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC10.93□□□□□ -0.66
VGLL1Q99990 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC10.93□□□□□ -0.66
VGLL1Q99990 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC10.93□□□□□ -0.66
VGLL1Q99990 AC134312.5-201ENST00000568031 1313 ntBASIC10.93□□□□□ -0.66
VGLL1Q99990 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
VGLL1Q99990 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC10.93□□□□□ -0.66
VGLL1Q99990 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC10.93□□□□□ -0.66
VGLL1Q99990 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC10.93□□□□□ -0.66
VGLL1Q99990 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
VGLL1Q99990 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms