Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 DNM1P41-201ENST00000623634 3350 ntBASIC13.15□□□□□ -0.3
SNX18Q96RF0 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNX18Q96RF0 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SNX18Q96RF0 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNX18Q96RF0 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNX18Q96RF0 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNX18Q96RF0 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNX18Q96RF0 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SNX18Q96RF0 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNX18Q96RF0 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SNX18Q96RF0 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 AC133552.6-201ENST00000613406 534 ntBASIC13.15□□□□□ -0.3
SNX18Q96RF0 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 AL022323.5-201ENST00000624101 2059 ntBASIC13.15□□□□□ -0.3
SNX18Q96RF0 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SNX18Q96RF0 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNX18Q96RF0 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.15□□□□□ -0.3
SNX18Q96RF0 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SNX18Q96RF0 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNX18Q96RF0 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNX18Q96RF0 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SNX18Q96RF0 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNX18Q96RF0 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.14□□□□□ -0.31
SNX18Q96RF0 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SNX18Q96RF0 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.14□□□□□ -0.31
SNX18Q96RF0 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
SNX18Q96RF0 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.14□□□□□ -0.31
SNX18Q96RF0 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SNX18Q96RF0 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 KRT223P-202ENST00000449164 1292 ntBASIC13.14□□□□□ -0.31
SNX18Q96RF0 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.14□□□□□ -0.31
SNX18Q96RF0 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.14□□□□□ -0.31
SNX18Q96RF0 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SNX18Q96RF0 TDH-203ENST00000531764 1110 ntBASIC13.14□□□□□ -0.31
SNX18Q96RF0 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SNX18Q96RF0 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.14□□□□□ -0.31
SNX18Q96RF0 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
SNX18Q96RF0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.14□□□□□ -0.31
SNX18Q96RF0 BTNL10-201ENST00000595971 695 ntBASIC13.14□□□□□ -0.31
SNX18Q96RF0 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.14□□□□□ -0.31
SNX18Q96RF0 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.14□□□□□ -0.31
SNX18Q96RF0 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SNX18Q96RF0 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.14□□□□□ -0.31
SNX18Q96RF0 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.14□□□□□ -0.31
SNX18Q96RF0 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms