Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 KRT8P4-201ENST00000509735 1454 ntBASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 AC092933.1-201ENST00000393644 945 ntBASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 BCRP2-202ENST00000447763 634 ntBASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 BCRP6-201ENST00000510112 632 ntBASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 BCRP7-201ENST00000511549 544 ntBASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 PTP4A1P2-201ENST00000546033 454 ntBASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 AC078819.1-201ENST00000547454 765 ntBASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 AC012085.1-201ENST00000548270 765 ntBASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 TP53TG3HP-202ENST00000569755 579 ntBASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 MIR4783-201ENST00000580343 82 ntBASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 E2F3P2-201ENST00000447755 1422 ntBASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 AL359845.1-201ENST00000458202 1648 ntBASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 FAM8A4P-201ENST00000435433 1213 ntBASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 INE1-201ENST00000456273 945 ntBASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 AC027601.3-201ENST00000622907 509 ntBASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.61■□□□□ 0.25
CHAMP1Q96JM3 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 MIR1909-201ENST00000411312 80 ntBASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 CD8B2-202ENST00000417670 633 ntBASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 MIR6805-201ENST00000615055 62 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms