Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 AC106820.3-201ENST00000561653 397 ntBASIC13.84□□□□□ -0.19
VPS33AQ96AX1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 AC006538.3-201ENST00000612495 578 ntBASIC13.84□□□□□ -0.19
VPS33AQ96AX1 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 AL033527.5-201ENST00000641382 801 ntBASIC13.84□□□□□ -0.19
VPS33AQ96AX1 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
VPS33AQ96AX1 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
VPS33AQ96AX1 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.83□□□□□ -0.19
VPS33AQ96AX1 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
VPS33AQ96AX1 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
VPS33AQ96AX1 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
VPS33AQ96AX1 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.83□□□□□ -0.19
VPS33AQ96AX1 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 AC011495.1-201ENST00000498085 584 ntBASIC13.83□□□□□ -0.2
VPS33AQ96AX1 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 RPSAP52-203ENST00000622976 1023 ntBASIC13.83□□□□□ -0.2
VPS33AQ96AX1 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS33AQ96AX1 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS33AQ96AX1 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS33AQ96AX1 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
VPS33AQ96AX1 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS33AQ96AX1 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.82□□□□□ -0.2
VPS33AQ96AX1 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.82□□□□□ -0.2
VPS33AQ96AX1 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.82□□□□□ -0.2
VPS33AQ96AX1 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS33AQ96AX1 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.82□□□□□ -0.2
VPS33AQ96AX1 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
VPS33AQ96AX1 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS33AQ96AX1 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VPS33AQ96AX1 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS33AQ96AX1 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
VPS33AQ96AX1 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS33AQ96AX1 PCDHA6-201ENST00000378126 3267 ntBASIC13.82□□□□□ -0.2
VPS33AQ96AX1 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
VPS33AQ96AX1 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
VPS33AQ96AX1 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.82□□□□□ -0.2
VPS33AQ96AX1 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
VPS33AQ96AX1 TPM3P8-201ENST00000330554 643 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms