Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 AC136475.9-201ENST00000605240 497 ntBASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 AC112702.1-201ENST00000623712 366 ntBASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 CD9-212ENST00000610354 1315 ntTSL 5 BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 AC105917.1-201ENST00000506637 2539 ntBASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 TPM3P7-201ENST00000338274 732 ntBASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 AC067942.1-202ENST00000471756 1057 ntBASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 AC090616.6-202ENST00000583601 1088 ntBASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 AL109983.1-201ENST00000603234 646 ntBASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 AC008038.1-201ENST00000634247 1314 ntBASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC18.22■□□□□ 0.51
COL22A1Q8NFW1 OS9-207ENST00000439210 1946 ntTSL 2 BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 RPS6-201ENST00000315377 863 ntTSL 3 BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 SERF2-204ENST00000402131 586 ntTSL 2 BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 PGAM1P10-201ENST00000402426 761 ntBASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 CXXC1P1-202ENST00000489409 1212 ntBASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 HNRNPA1P4-201ENST00000509706 756 ntBASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 MIR4539-201ENST00000579784 60 ntBASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 MKRN7P-201ENST00000433469 1371 ntBASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 AF013593.1-201ENST00000458074 1487 ntBASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 AC104640.1-201ENST00000562617 2109 ntBASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL22A1Q8NFW1 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
COL22A1Q8NFW1 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
COL22A1Q8NFW1 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
COL22A1Q8NFW1 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
COL22A1Q8NFW1 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 IMPDH1P5-201ENST00000439688 1540 ntBASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 KRT18P45-201ENST00000515347 1333 ntBASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 AC024475.2-201ENST00000312173 879 ntBASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 AL391903.1-201ENST00000407513 365 ntBASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 RNA5SP407-201ENST00000410275 110 ntBASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 HNRNPA1P68-201ENST00000425806 979 ntBASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 AP000343.1-201ENST00000440602 385 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms