Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 PAM-203ENST00000346918 3302 ntTSL 5 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 F10-203ENST00000409306 1450 ntTSL 3 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 AC011481.3-201ENST00000623895 5594 ntBASIC10.73□□□□□ -0.69
NUP35Q8NFH5 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 LINC00638-201ENST00000555578 2518 ntBASIC10.73□□□□□ -0.69
NUP35Q8NFH5 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 GPS2P2-201ENST00000430745 888 ntBASIC10.73□□□□□ -0.69
NUP35Q8NFH5 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 AL591424.1-201ENST00000442569 1213 ntBASIC10.73□□□□□ -0.69
NUP35Q8NFH5 AC009078.2-202ENST00000463353 338 ntBASIC10.73□□□□□ -0.69
NUP35Q8NFH5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 AC022145.2-201ENST00000598203 171 ntBASIC10.73□□□□□ -0.69
NUP35Q8NFH5 MIR6080-201ENST00000617359 66 ntBASIC10.73□□□□□ -0.69
NUP35Q8NFH5 GPER1-207ENST00000619052 571 ntTSL 2 BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 CR392039.2-201ENST00000623182 509 ntBASIC10.73□□□□□ -0.69
NUP35Q8NFH5 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 SUPT20HL1-201ENST00000436466 2618 ntBASIC10.73□□□□□ -0.69
NUP35Q8NFH5 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 OS9-203ENST00000389142 2457 ntTSL 5 BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NUP35Q8NFH5 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 TRIM80P-201ENST00000455685 2848 ntBASIC10.72□□□□□ -0.69
NUP35Q8NFH5 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 USP39-207ENST00000450066 2086 ntTSL 2 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms