Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LRRC28Q86X40 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.84□□□□□ -0.35
LRRC28Q86X40 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.84□□□□□ -0.35
LRRC28Q86X40 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.84□□□□□ -0.35
LRRC28Q86X40 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
LRRC28Q86X40 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.84□□□□□ -0.35
LRRC28Q86X40 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
LRRC28Q86X40 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.84□□□□□ -0.35
LRRC28Q86X40 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LRRC28Q86X40 AL008721.1-201ENST00000609964 604 ntBASIC12.84□□□□□ -0.35
LRRC28Q86X40 MIR6805-201ENST00000615055 62 ntBASIC12.84□□□□□ -0.35
LRRC28Q86X40 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LRRC28Q86X40 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LRRC28Q86X40 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LRRC28Q86X40 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LRRC28Q86X40 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 MSTO2P-201ENST00000314835 1709 ntBASIC12.84□□□□□ -0.35
LRRC28Q86X40 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 MKRN5P-201ENST00000445263 1467 ntBASIC12.84□□□□□ -0.35
LRRC28Q86X40 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.84□□□□□ -0.35
LRRC28Q86X40 AC024075.2-201ENST00000598112 1473 ntBASIC12.84□□□□□ -0.35
LRRC28Q86X40 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
LRRC28Q86X40 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.35
LRRC28Q86X40 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.35
LRRC28Q86X40 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
LRRC28Q86X40 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.83□□□□□ -0.35
LRRC28Q86X40 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LRRC28Q86X40 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LRRC28Q86X40 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
LRRC28Q86X40 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.83□□□□□ -0.36
LRRC28Q86X40 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LRRC28Q86X40 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.36
LRRC28Q86X40 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.83□□□□□ -0.36
LRRC28Q86X40 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 AC016694.1-201ENST00000434179 700 ntBASIC12.83□□□□□ -0.36
LRRC28Q86X40 AC022210.1-201ENST00000449856 793 ntBASIC12.83□□□□□ -0.36
LRRC28Q86X40 CROCCP4-201ENST00000457096 498 ntBASIC12.83□□□□□ -0.36
LRRC28Q86X40 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LRRC28Q86X40 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.83□□□□□ -0.36
LRRC28Q86X40 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
LRRC28Q86X40 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.83□□□□□ -0.36
LRRC28Q86X40 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.83□□□□□ -0.36
LRRC28Q86X40 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.83□□□□□ -0.36
LRRC28Q86X40 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LRRC28Q86X40 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
LRRC28Q86X40 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
LRRC28Q86X40 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
LRRC28Q86X40 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.83□□□□□ -0.36
LRRC28Q86X40 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.83□□□□□ -0.36
LRRC28Q86X40 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRC28Q86X40 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRC28Q86X40 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LRRC28Q86X40 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
LRRC28Q86X40 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms