Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SCXQ7RTU7 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
SCXQ7RTU7 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC9.62□□□□□ -0.87
SCXQ7RTU7 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SCXQ7RTU7 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCXQ7RTU7 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
SCXQ7RTU7 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC9.62□□□□□ -0.87
SCXQ7RTU7 KRTAP10-13P-201ENST00000412914 571 ntBASIC9.62□□□□□ -0.87
SCXQ7RTU7 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC9.62□□□□□ -0.87
SCXQ7RTU7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCXQ7RTU7 AC079178.1-201ENST00000420915 656 ntBASIC9.62□□□□□ -0.87
SCXQ7RTU7 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC9.62□□□□□ -0.87
SCXQ7RTU7 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCXQ7RTU7 EIF3FP3-201ENST00000434851 1086 ntBASIC9.62□□□□□ -0.87
SCXQ7RTU7 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCXQ7RTU7 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC9.62□□□□□ -0.87
SCXQ7RTU7 TPI1-206ENST00000488464 791 ntTSL 5 BASIC9.62□□□□□ -0.87
SCXQ7RTU7 COX5BP1-201ENST00000507622 393 ntBASIC9.62□□□□□ -0.87
SCXQ7RTU7 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC9.62□□□□□ -0.87
SCXQ7RTU7 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCXQ7RTU7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC9.62□□□□□ -0.87
SCXQ7RTU7 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC9.62□□□□□ -0.87
SCXQ7RTU7 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
SCXQ7RTU7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC9.62□□□□□ -0.87
SCXQ7RTU7 IGHV3OR16-16-201ENST00000563644 343 ntBASIC9.62□□□□□ -0.87
SCXQ7RTU7 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
SCXQ7RTU7 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
SCXQ7RTU7 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SCXQ7RTU7 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCXQ7RTU7 OR10B1P-201ENST00000601666 907 ntBASIC9.62□□□□□ -0.87
SCXQ7RTU7 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC9.62□□□□□ -0.87
SCXQ7RTU7 AC084346.2-201ENST00000607097 949 ntBASIC9.62□□□□□ -0.87
SCXQ7RTU7 AC244452.3-201ENST00000636814 210 ntBASIC9.62□□□□□ -0.87
SCXQ7RTU7 AL645728.2-202ENST00000641679 227 ntBASIC9.62□□□□□ -0.87
SCXQ7RTU7 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCXQ7RTU7 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCXQ7RTU7 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC9.62□□□□□ -0.87
SCXQ7RTU7 AL118506.1-201ENST00000601296 3082 ntBASIC9.62□□□□□ -0.87
SCXQ7RTU7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC9.62□□□□□ -0.87
SCXQ7RTU7 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCXQ7RTU7 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
SCXQ7RTU7 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
SCXQ7RTU7 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCXQ7RTU7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SCXQ7RTU7 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC9.62□□□□□ -0.87
SCXQ7RTU7 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SCXQ7RTU7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCXQ7RTU7 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
SCXQ7RTU7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCXQ7RTU7 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC9.62□□□□□ -0.87
SCXQ7RTU7 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC9.62□□□□□ -0.87
SCXQ7RTU7 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC9.62□□□□□ -0.87
SCXQ7RTU7 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCXQ7RTU7 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCXQ7RTU7 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC9.62□□□□□ -0.87
SCXQ7RTU7 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCXQ7RTU7 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCXQ7RTU7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCXQ7RTU7 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCXQ7RTU7 AL023775.1-201ENST00000454907 1746 ntBASIC9.62□□□□□ -0.87
SCXQ7RTU7 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SCXQ7RTU7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCXQ7RTU7 TCAF1P1-201ENST00000414990 2232 ntBASIC9.62□□□□□ -0.87
SCXQ7RTU7 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 AC055811.4-201ENST00000624039 1754 ntBASIC9.61□□□□□ -0.87
SCXQ7RTU7 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 HNRNPA1P32-201ENST00000396326 963 ntBASIC9.61□□□□□ -0.87
SCXQ7RTU7 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 NDUFAB1P1-201ENST00000404262 460 ntBASIC9.61□□□□□ -0.87
SCXQ7RTU7 RPL5P21-201ENST00000404620 815 ntBASIC9.61□□□□□ -0.87
SCXQ7RTU7 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 PTPA-218ENST00000435132 618 ntTSL 2 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 AC004898.1-201ENST00000451057 766 ntBASIC9.61□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms