Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 AL662890.1-201ENST00000396818 632 ntBASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 ISCA2P1-201ENST00000425548 448 ntBASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 AL596276.2-201ENST00000447525 331 ntBASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 AC090857.1-201ENST00000527400 390 ntBASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 AC124068.2-201ENST00000569473 1109 ntBASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 MIR3619-201ENST00000579667 83 ntBASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 AC097724.1-201ENST00000609581 426 ntBASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFWD3Q6PCD5 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 CHMP4BP1-201ENST00000556017 588 ntBASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 RN7SL574P-201ENST00000581512 297 ntBASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFWD3Q6PCD5 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RFWD3Q6PCD5 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
RFWD3Q6PCD5 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RFWD3Q6PCD5 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
RFWD3Q6PCD5 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 AHCYP4-201ENST00000419201 1315 ntBASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFWD3Q6PCD5 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 523.1 ms