Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 MEP1AP4-201ENST00000423244 1087 ntBASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 AK2P2-201ENST00000439142 405 ntBASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 RPL13AP25-201ENST00000484130 612 ntBASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 FTH1-202ENST00000526640 786 ntTSL 2 BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 AC027307.3-201ENST00000594262 1100 ntBASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 AC138696.2-201ENST00000607376 223 ntBASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 AC004233.3-201ENST00000607794 1269 ntBASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 AC010970.1-201ENST00000445125 1848 ntBASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 AL022323.5-201ENST00000624101 2059 ntBASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ANKRD55Q3KP44 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 AC102953.2-201ENST00000609755 3026 ntBASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 TSSK5P-201ENST00000423978 907 ntBASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 RN7SL399P-201ENST00000471648 279 ntBASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 REEP4-207ENST00000523293 913 ntTSL 3 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 STOM-203ENST00000538954 1257 ntTSL 5 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 COQ6-210ENST00000554920 649 ntTSL 3 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 AC027237.1-201ENST00000560942 655 ntBASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 AC005586.2-201ENST00000563946 837 ntBASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 RARRES2P5-201ENST00000564013 466 ntBASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 SRD5A3P1-201ENST00000603021 949 ntBASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms