Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CACNA1BQ00975 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CACNA1BQ00975 POLR3DP1-201ENST00000398689 1176 ntBASIC13.05□□□□□ -0.32
CACNA1BQ00975 SNORD88B-201ENST00000408454 91 ntBASIC13.05□□□□□ -0.32
CACNA1BQ00975 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CACNA1BQ00975 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CACNA1BQ00975 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CACNA1BQ00975 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CACNA1BQ00975 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CACNA1BQ00975 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CACNA1BQ00975 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CACNA1BQ00975 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CACNA1BQ00975 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CACNA1BQ00975 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CACNA1BQ00975 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
CACNA1BQ00975 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CACNA1BQ00975 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 RHOC-205ENST00000369636 786 ntTSL 2 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CACNA1BQ00975 SERPINB8P1-201ENST00000401898 377 ntBASIC13.05□□□□□ -0.32
CACNA1BQ00975 AC006987.1-201ENST00000413610 527 ntBASIC13.05□□□□□ -0.32
CACNA1BQ00975 AKR1B1P4-201ENST00000426552 922 ntBASIC13.05□□□□□ -0.32
CACNA1BQ00975 ACP1-207ENST00000439645 605 ntTSL 2 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CACNA1BQ00975 RN7SL477P-201ENST00000488440 286 ntBASIC13.05□□□□□ -0.32
CACNA1BQ00975 RN7SL638P-201ENST00000494527 290 ntBASIC13.05□□□□□ -0.32
CACNA1BQ00975 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 KLF17P1-201ENST00000547105 1126 ntBASIC13.05□□□□□ -0.32
CACNA1BQ00975 AC021439.1-201ENST00000562975 591 ntTSL 4 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 RN7SL556P-201ENST00000582856 298 ntBASIC13.05□□□□□ -0.32
CACNA1BQ00975 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 SNU13-201ENST00000215956 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CACNA1BQ00975 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CACNA1BQ00975 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CACNA1BQ00975 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 AC009093.10-201ENST00000641956 1442 ntBASIC13.04□□□□□ -0.32
CACNA1BQ00975 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 HLA-DQB3-203ENST00000425319 356 ntBASIC13.04□□□□□ -0.32
CACNA1BQ00975 AC006001.3-205ENST00000428370 579 ntBASIC13.04□□□□□ -0.32
CACNA1BQ00975 GRPEL2P1-201ENST00000453145 339 ntBASIC13.04□□□□□ -0.32
CACNA1BQ00975 MT3-202ENST00000561640 514 ntTSL 3 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 PIMREG-209ENST00000576056 833 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 BRCA1-225ENST00000586385 781 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms