Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.82■□□□□ 0.28
MRE11P49959 MIR4722-201ENST00000578292 60 ntBASIC16.82■□□□□ 0.28
MRE11P49959 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MRE11P49959 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.82■□□□□ 0.28
MRE11P49959 AL021578.1-201ENST00000613646 709 ntBASIC16.82■□□□□ 0.28
MRE11P49959 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.82■□□□□ 0.28
MRE11P49959 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.82■□□□□ 0.28
MRE11P49959 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.82■□□□□ 0.28
MRE11P49959 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
MRE11P49959 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRE11P49959 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.82■□□□□ 0.28
MRE11P49959 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRE11P49959 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC16.82■□□□□ 0.28
MRE11P49959 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRE11P49959 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC16.82■□□□□ 0.28
MRE11P49959 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MRE11P49959 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRE11P49959 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRE11P49959 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC16.82■□□□□ 0.28
MRE11P49959 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRE11P49959 PCDHB19P-202ENST00000625133 2914 ntBASIC16.82■□□□□ 0.28
MRE11P49959 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC16.82■□□□□ 0.28
MRE11P49959 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MRE11P49959 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC16.81■□□□□ 0.28
MRE11P49959 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRE11P49959 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
MRE11P49959 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
MRE11P49959 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
MRE11P49959 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRE11P49959 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRE11P49959 FTO-214ENST00000636218 2227 ntTSL 5 BASIC16.81■□□□□ 0.28
MRE11P49959 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MRE11P49959 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MRE11P49959 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MRE11P49959 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MRE11P49959 PID1-202ENST00000392054 2745 ntTSL 2 BASIC16.81■□□□□ 0.28
MRE11P49959 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC16.81■□□□□ 0.28
MRE11P49959 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.81■□□□□ 0.28
MRE11P49959 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
MRE11P49959 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MRE11P49959 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
MRE11P49959 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
MRE11P49959 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
MRE11P49959 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
MRE11P49959 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.81■□□□□ 0.28
MRE11P49959 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.81■□□□□ 0.28
MRE11P49959 AC007389.4-201ENST00000454674 793 ntBASIC16.81■□□□□ 0.28
MRE11P49959 PFN1P12-201ENST00000455938 534 ntBASIC16.81■□□□□ 0.28
MRE11P49959 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.81■□□□□ 0.28
MRE11P49959 AC093004.1-201ENST00000508850 424 ntBASIC16.81■□□□□ 0.28
MRE11P49959 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.81■□□□□ 0.28
MRE11P49959 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MRE11P49959 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.81■□□□□ 0.28
MRE11P49959 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.81■□□□□ 0.28
MRE11P49959 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.81■□□□□ 0.28
MRE11P49959 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRE11P49959 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.81■□□□□ 0.28
MRE11P49959 AC015967.2-201ENST00000624092 234 ntBASIC16.81■□□□□ 0.28
MRE11P49959 AC006435.4-201ENST00000625037 234 ntBASIC16.81■□□□□ 0.28
MRE11P49959 AL356737.1-201ENST00000634391 234 ntBASIC16.81■□□□□ 0.28
MRE11P49959 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
MRE11P49959 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MRE11P49959 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRE11P49959 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MRE11P49959 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRE11P49959 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
MRE11P49959 AC060814.4-201ENST00000594169 2163 ntBASIC16.81■□□□□ 0.28
MRE11P49959 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRE11P49959 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRE11P49959 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MRE11P49959 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRE11P49959 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
MRE11P49959 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC16.8■□□□□ 0.28
MRE11P49959 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRE11P49959 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
MRE11P49959 DDC-214ENST00000622873 1839 ntTSL 3 BASIC16.8■□□□□ 0.28
MRE11P49959 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRE11P49959 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC16.8■□□□□ 0.28
MRE11P49959 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MRE11P49959 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MRE11P49959 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRE11P49959 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
MRE11P49959 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MRE11P49959 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MRE11P49959 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MRE11P49959 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRE11P49959 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MRE11P49959 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MRE11P49959 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
MRE11P49959 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.8■□□□□ 0.28
MRE11P49959 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
MRE11P49959 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.8■□□□□ 0.28
MRE11P49959 IGHJ2P-201ENST00000454480 60 ntBASIC16.8■□□□□ 0.28
MRE11P49959 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MRE11P49959 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.8■□□□□ 0.28
MRE11P49959 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MRE11P49959 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.8■□□□□ 0.28
MRE11P49959 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.8■□□□□ 0.28
MRE11P49959 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.8■□□□□ 0.28
MRE11P49959 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms