Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD4P46934 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
NEDD4P46934 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD4P46934 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC16.75■□□□□ 0.27
NEDD4P46934 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD4P46934 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.75■□□□□ 0.27
NEDD4P46934 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.75■□□□□ 0.27
NEDD4P46934 AC073869.2-201ENST00000417338 1026 ntBASIC16.75■□□□□ 0.27
NEDD4P46934 AC008723.1-201ENST00000506922 207 ntBASIC16.75■□□□□ 0.27
NEDD4P46934 AC134698.3-201ENST00000523880 214 ntBASIC16.75■□□□□ 0.27
NEDD4P46934 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.75■□□□□ 0.27
NEDD4P46934 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.75■□□□□ 0.27
NEDD4P46934 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.75■□□□□ 0.27
NEDD4P46934 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD4P46934 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.75■□□□□ 0.27
NEDD4P46934 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.75■□□□□ 0.27
NEDD4P46934 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
NEDD4P46934 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.75■□□□□ 0.27
NEDD4P46934 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.75■□□□□ 0.27
NEDD4P46934 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD4P46934 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD4P46934 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD4P46934 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD4P46934 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD4P46934 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NEDD4P46934 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.75■□□□□ 0.27
NEDD4P46934 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.75■□□□□ 0.27
NEDD4P46934 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD4P46934 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NEDD4P46934 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD4P46934 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD4P46934 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD4P46934 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NEDD4P46934 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.75■□□□□ 0.27
NEDD4P46934 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.75■□□□□ 0.27
NEDD4P46934 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD4P46934 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD4P46934 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD4P46934 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD4P46934 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD4P46934 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
NEDD4P46934 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD4P46934 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD4P46934 AL583805.1-201ENST00000391389 531 ntBASIC16.74■□□□□ 0.27
NEDD4P46934 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD4P46934 TMEM198B-204ENST00000484016 896 ntBASIC16.74■□□□□ 0.27
NEDD4P46934 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC16.74■□□□□ 0.27
NEDD4P46934 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.74■□□□□ 0.27
NEDD4P46934 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.74■□□□□ 0.27
NEDD4P46934 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
NEDD4P46934 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.74■□□□□ 0.27
NEDD4P46934 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD4P46934 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.74■□□□□ 0.27
NEDD4P46934 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.74■□□□□ 0.27
NEDD4P46934 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.74■□□□□ 0.27
NEDD4P46934 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.74■□□□□ 0.27
NEDD4P46934 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD4P46934 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD4P46934 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD4P46934 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD4P46934 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD4P46934 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD4P46934 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NEDD4P46934 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.74■□□□□ 0.27
NEDD4P46934 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD4P46934 FAM90A2P-201ENST00000511144 1395 ntBASIC16.74■□□□□ 0.27
NEDD4P46934 FAM90A25P-201ENST00000528404 1395 ntBASIC16.74■□□□□ 0.27
NEDD4P46934 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD4P46934 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD4P46934 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NEDD4P46934 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD4P46934 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
NEDD4P46934 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
NEDD4P46934 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD4P46934 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
NEDD4P46934 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD4P46934 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
NEDD4P46934 AC023794.5-201ENST00000564380 2157 ntBASIC16.74■□□□□ 0.27
NEDD4P46934 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD4P46934 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NEDD4P46934 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NEDD4P46934 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEDD4P46934 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NEDD4P46934 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.73■□□□□ 0.27
NEDD4P46934 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.73■□□□□ 0.27
NEDD4P46934 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NEDD4P46934 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NEDD4P46934 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.73■□□□□ 0.27
NEDD4P46934 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NEDD4P46934 UPF3AP2-201ENST00000457924 1132 ntBASIC16.73■□□□□ 0.27
NEDD4P46934 NDUFS6P1-201ENST00000485187 316 ntBASIC16.73■□□□□ 0.27
NEDD4P46934 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.73■□□□□ 0.27
NEDD4P46934 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.73■□□□□ 0.27
NEDD4P46934 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NEDD4P46934 AL021707.6-201ENST00000609212 491 ntBASIC16.73■□□□□ 0.27
NEDD4P46934 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16.73■□□□□ 0.27
NEDD4P46934 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEDD4P46934 AC015967.2-201ENST00000624092 234 ntBASIC16.73■□□□□ 0.27
NEDD4P46934 AC006435.4-201ENST00000625037 234 ntBASIC16.73■□□□□ 0.27
NEDD4P46934 AL356737.1-201ENST00000634391 234 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms