Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CEACAM3P40198 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
CEACAM3P40198 HAL-202ENST00000538703 2637 ntTSL 2 BASIC11.77□□□□□ -0.53
CEACAM3P40198 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
CEACAM3P40198 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC11.77□□□□□ -0.53
CEACAM3P40198 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CEACAM3P40198 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.77□□□□□ -0.53
CEACAM3P40198 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
CEACAM3P40198 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
CEACAM3P40198 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
CEACAM3P40198 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CEACAM3P40198 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC11.77□□□□□ -0.53
CEACAM3P40198 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
CEACAM3P40198 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
CEACAM3P40198 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CEACAM3P40198 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CEACAM3P40198 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CEACAM3P40198 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CEACAM3P40198 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CEACAM3P40198 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CEACAM3P40198 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC11.77□□□□□ -0.53
CEACAM3P40198 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.77□□□□□ -0.53
CEACAM3P40198 AC073957.3-201ENST00000609998 6758 ntBASIC11.77□□□□□ -0.53
CEACAM3P40198 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CEACAM3P40198 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC11.77□□□□□ -0.53
CEACAM3P40198 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CEACAM3P40198 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CEACAM3P40198 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC11.76□□□□□ -0.53
CEACAM3P40198 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC11.76□□□□□ -0.53
CEACAM3P40198 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CEACAM3P40198 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CEACAM3P40198 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC11.76□□□□□ -0.53
CEACAM3P40198 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CEACAM3P40198 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CEACAM3P40198 AC097359.2-201ENST00000604992 2389 ntBASIC11.76□□□□□ -0.53
CEACAM3P40198 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CEACAM3P40198 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CEACAM3P40198 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC11.76□□□□□ -0.53
CEACAM3P40198 AC011498.7-201ENST00000624986 2027 ntBASIC11.76□□□□□ -0.53
CEACAM3P40198 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CEACAM3P40198 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
CEACAM3P40198 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CEACAM3P40198 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC11.76□□□□□ -0.53
CEACAM3P40198 CSH2-202ENST00000345366 598 ntTSL 5 BASIC11.76□□□□□ -0.53
CEACAM3P40198 SMS-201ENST00000379404 1174 ntTSL 3 BASIC11.76□□□□□ -0.53
CEACAM3P40198 USP17L6P-201ENST00000382470 1197 ntBASIC11.76□□□□□ -0.53
CEACAM3P40198 HNRNPA1P32-201ENST00000396326 963 ntBASIC11.76□□□□□ -0.53
CEACAM3P40198 AL008707.1-201ENST00000422498 534 ntBASIC11.76□□□□□ -0.53
CEACAM3P40198 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC11.76□□□□□ -0.53
CEACAM3P40198 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC11.76□□□□□ -0.53
CEACAM3P40198 AC011742.3-201ENST00000439053 820 ntBASIC11.76□□□□□ -0.53
CEACAM3P40198 ST13P19-201ENST00000442505 1124 ntBASIC11.76□□□□□ -0.53
CEACAM3P40198 KLF2P1-201ENST00000447438 1042 ntBASIC11.76□□□□□ -0.53
CEACAM3P40198 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC11.76□□□□□ -0.53
CEACAM3P40198 FADS2-212ENST00000522639 360 ntTSL 5 BASIC11.76□□□□□ -0.53
CEACAM3P40198 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC11.76□□□□□ -0.53
CEACAM3P40198 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC11.76□□□□□ -0.53
CEACAM3P40198 FADS2-215ENST00000574708 385 ntTSL 3 BASIC11.76□□□□□ -0.53
CEACAM3P40198 MIR4783-201ENST00000580343 82 ntBASIC11.76□□□□□ -0.53
CEACAM3P40198 AC104506.1-201ENST00000609247 429 ntBASIC11.76□□□□□ -0.53
CEACAM3P40198 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC11.76□□□□□ -0.53
CEACAM3P40198 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC11.76□□□□□ -0.53
CEACAM3P40198 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
CEACAM3P40198 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC11.76□□□□□ -0.53
CEACAM3P40198 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CEACAM3P40198 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
CEACAM3P40198 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CEACAM3P40198 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CEACAM3P40198 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CEACAM3P40198 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
CEACAM3P40198 GSN-209ENST00000449733 2702 ntTSL 2 BASIC11.76□□□□□ -0.53
CEACAM3P40198 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CEACAM3P40198 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC11.76□□□□□ -0.53
CEACAM3P40198 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CEACAM3P40198 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CEACAM3P40198 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
CEACAM3P40198 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CEACAM3P40198 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CEACAM3P40198 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC11.76□□□□□ -0.53
CEACAM3P40198 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CEACAM3P40198 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC11.76□□□□□ -0.53
CEACAM3P40198 MBLAC2-202ENST00000514906 1936 ntBASIC11.76□□□□□ -0.53
CEACAM3P40198 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CEACAM3P40198 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC11.76□□□□□ -0.53
CEACAM3P40198 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CEACAM3P40198 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CEACAM3P40198 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
CEACAM3P40198 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CEACAM3P40198 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CEACAM3P40198 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
CEACAM3P40198 TCAM1P-207ENST00000485295 1537 ntBASIC11.76□□□□□ -0.53
CEACAM3P40198 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CEACAM3P40198 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
CEACAM3P40198 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CEACAM3P40198 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CEACAM3P40198 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CEACAM3P40198 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CEACAM3P40198 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CEACAM3P40198 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CEACAM3P40198 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms