Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.31■□□□□ 0.2
COPB2P35606 IL9RP3-201ENST00000442856 1674 ntBASIC16.3■□□□□ 0.2
COPB2P35606 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
COPB2P35606 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.3■□□□□ 0.2
COPB2P35606 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COPB2P35606 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPB2P35606 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPB2P35606 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COPB2P35606 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPB2P35606 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.3■□□□□ 0.2
COPB2P35606 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COPB2P35606 RPL13AP3-202ENST00000494676 1473 ntBASIC16.3■□□□□ 0.2
COPB2P35606 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.3■□□□□ 0.2
COPB2P35606 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPB2P35606 AC015656.1-201ENST00000624209 3578 ntBASIC16.3■□□□□ 0.2
COPB2P35606 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.3■□□□□ 0.2
COPB2P35606 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
COPB2P35606 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COPB2P35606 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
COPB2P35606 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPB2P35606 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPB2P35606 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.3■□□□□ 0.2
COPB2P35606 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPB2P35606 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPB2P35606 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
COPB2P35606 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COPB2P35606 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.3■□□□□ 0.2
COPB2P35606 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPB2P35606 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.3■□□□□ 0.2
COPB2P35606 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.3■□□□□ 0.2
COPB2P35606 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPB2P35606 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC16.3■□□□□ 0.2
COPB2P35606 HINT1-205ENST00000508488 703 ntTSL 2 BASIC16.3■□□□□ 0.2
COPB2P35606 AC084752.1-201ENST00000509766 622 ntBASIC16.3■□□□□ 0.2
COPB2P35606 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC16.3■□□□□ 0.2
COPB2P35606 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COPB2P35606 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC16.3■□□□□ 0.2
COPB2P35606 SNORD3B-1-201ENST00000577988 758 ntBASIC16.3■□□□□ 0.2
COPB2P35606 AP005264.5-201ENST00000590066 467 ntBASIC16.3■□□□□ 0.2
COPB2P35606 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.3■□□□□ 0.2
COPB2P35606 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC16.3■□□□□ 0.2
COPB2P35606 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.3■□□□□ 0.2
COPB2P35606 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
COPB2P35606 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPB2P35606 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPB2P35606 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
COPB2P35606 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPB2P35606 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPB2P35606 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPB2P35606 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
COPB2P35606 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.3■□□□□ 0.2
COPB2P35606 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COPB2P35606 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COPB2P35606 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COPB2P35606 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COPB2P35606 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
COPB2P35606 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COPB2P35606 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.29■□□□□ 0.2
COPB2P35606 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.29■□□□□ 0.2
COPB2P35606 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.29■□□□□ 0.2
COPB2P35606 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COPB2P35606 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COPB2P35606 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COPB2P35606 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COPB2P35606 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COPB2P35606 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC16.29■□□□□ 0.2
COPB2P35606 RPL13AP19-201ENST00000434320 584 ntBASIC16.29■□□□□ 0.2
COPB2P35606 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC16.29■□□□□ 0.2
COPB2P35606 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COPB2P35606 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COPB2P35606 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.29■□□□□ 0.2
COPB2P35606 TPT1P11-201ENST00000458482 498 ntBASIC16.29■□□□□ 0.2
COPB2P35606 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.29■□□□□ 0.2
COPB2P35606 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC16.29■□□□□ 0.2
COPB2P35606 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
COPB2P35606 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COPB2P35606 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC16.29■□□□□ 0.2
COPB2P35606 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COPB2P35606 LINC00244-201ENST00000625073 613 ntBASIC16.29■□□□□ 0.2
COPB2P35606 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.29■□□□□ 0.2
COPB2P35606 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COPB2P35606 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COPB2P35606 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COPB2P35606 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COPB2P35606 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COPB2P35606 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COPB2P35606 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COPB2P35606 AC007952.5-201ENST00000572818 1486 ntBASIC16.29■□□□□ 0.2
COPB2P35606 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.29■□□□□ 0.2
COPB2P35606 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
COPB2P35606 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COPB2P35606 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.28■□□□□ 0.2
COPB2P35606 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COPB2P35606 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC16.28■□□□□ 0.2
COPB2P35606 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COPB2P35606 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COPB2P35606 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COPB2P35606 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COPB2P35606 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
COPB2P35606 AC140479.7-201ENST00000636301 2332 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms