Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RFC1P35251 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.13■□□□□ 0.01
RFC1P35251 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RFC1P35251 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.13■□□□□ 0.01
RFC1P35251 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
RFC1P35251 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.13■□□□□ 0.01
RFC1P35251 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.13■□□□□ 0.01
RFC1P35251 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 AC004899.1-201ENST00000424687 1714 ntBASIC15.13■□□□□ 0.01
RFC1P35251 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.13■□□□□ 0.01
RFC1P35251 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 PGAM1P5-201ENST00000548011 764 ntBASIC15.13■□□□□ 0.01
RFC1P35251 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.13■□□□□ 0.01
RFC1P35251 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.13■□□□□ 0.01
RFC1P35251 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.13■□□□□ 0.01
RFC1P35251 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 AC104982.3-201ENST00000581995 514 ntBASIC15.13■□□□□ 0.01
RFC1P35251 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.13■□□□□ 0.01
RFC1P35251 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.13■□□□□ 0.01
RFC1P35251 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.13■□□□□ 0.01
RFC1P35251 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.13■□□□□ 0.01
RFC1P35251 BNIP3P13-201ENST00000599968 566 ntBASIC15.13■□□□□ 0.01
RFC1P35251 AC005695.3-201ENST00000614522 232 ntBASIC15.13■□□□□ 0.01
RFC1P35251 AL023803.2-201ENST00000620080 638 ntBASIC15.13■□□□□ 0.01
RFC1P35251 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.13■□□□□ 0.01
RFC1P35251 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.13■□□□□ 0.01
RFC1P35251 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.13■□□□□ 0.01
RFC1P35251 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC15.13■□□□□ 0.01
RFC1P35251 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 TUBB1P2-201ENST00000422712 1306 ntBASIC15.13■□□□□ 0.01
RFC1P35251 TUBB1P1-201ENST00000503144 1300 ntBASIC15.13■□□□□ 0.01
RFC1P35251 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.13■□□□□ 0.01
RFC1P35251 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.13■□□□□ 0.01
RFC1P35251 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
RFC1P35251 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.13■□□□□ 0.01
RFC1P35251 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.13■□□□□ 0.01
RFC1P35251 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFC1P35251 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFC1P35251 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RFC1P35251 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFC1P35251 AC089987.1-201ENST00000551654 2209 ntBASIC15.12■□□□□ 0.01
RFC1P35251 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFC1P35251 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.12■□□□□ 0.01
RFC1P35251 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RFC1P35251 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.12■□□□□ 0.01
RFC1P35251 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFC1P35251 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFC1P35251 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFC1P35251 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFC1P35251 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.12■□□□□ 0.01
RFC1P35251 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RFC1P35251 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RFC1P35251 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.12■□□□□ 0.01
RFC1P35251 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFC1P35251 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFC1P35251 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RFC1P35251 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.12■□□□□ 0.01
RFC1P35251 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.12■□□□□ 0.01
RFC1P35251 HLA-J-204ENST00000495278 958 ntBASIC15.12■□□□□ 0.01
RFC1P35251 AC022217.1-201ENST00000521069 738 ntBASIC15.12■□□□□ 0.01
RFC1P35251 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.12■□□□□ 0.01
RFC1P35251 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.12■□□□□ 0.01
RFC1P35251 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.12■□□□□ 0.01
RFC1P35251 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFC1P35251 AC090386.2-201ENST00000623010 1039 ntBASIC15.12■□□□□ 0.01
RFC1P35251 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
RFC1P35251 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFC1P35251 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFC1P35251 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFC1P35251 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFC1P35251 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RFC1P35251 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RFC1P35251 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.12■□□□□ 0.01
RFC1P35251 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFC1P35251 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFC1P35251 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RFC1P35251 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.12■□□□□ 0.01
RFC1P35251 AC023794.5-201ENST00000564380 2157 ntBASIC15.12■□□□□ 0.01
RFC1P35251 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFC1P35251 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFC1P35251 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFC1P35251 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RFC1P35251 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms