Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTNNA1P35221 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC15.2■□□□□ 0.02
CTNNA1P35221 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.2■□□□□ 0.02
CTNNA1P35221 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTNNA1P35221 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CTNNA1P35221 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CTNNA1P35221 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTNNA1P35221 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
CTNNA1P35221 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTNNA1P35221 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CTNNA1P35221 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CTNNA1P35221 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC15.19■□□□□ 0.02
CTNNA1P35221 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.19■□□□□ 0.02
CTNNA1P35221 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CTNNA1P35221 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTNNA1P35221 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTNNA1P35221 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.19■□□□□ 0.02
CTNNA1P35221 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTNNA1P35221 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.19■□□□□ 0.02
CTNNA1P35221 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC15.19■□□□□ 0.02
CTNNA1P35221 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC15.19■□□□□ 0.02
CTNNA1P35221 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTNNA1P35221 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTNNA1P35221 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTNNA1P35221 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CTNNA1P35221 AC010141.1-201ENST00000411585 623 ntBASIC15.19■□□□□ 0.02
CTNNA1P35221 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.19■□□□□ 0.02
CTNNA1P35221 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.19■□□□□ 0.02
CTNNA1P35221 COX5BP1-201ENST00000507622 393 ntBASIC15.19■□□□□ 0.02
CTNNA1P35221 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.19■□□□□ 0.02
CTNNA1P35221 SLC25A47P1-201ENST00000531577 414 ntBASIC15.19■□□□□ 0.02
CTNNA1P35221 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.19■□□□□ 0.02
CTNNA1P35221 AC015936.2-201ENST00000593177 259 ntBASIC15.19■□□□□ 0.02
CTNNA1P35221 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.19■□□□□ 0.02
CTNNA1P35221 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTNNA1P35221 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTNNA1P35221 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC15.19■□□□□ 0.02
CTNNA1P35221 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC15.19■□□□□ 0.02
CTNNA1P35221 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CTNNA1P35221 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CTNNA1P35221 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTNNA1P35221 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CTNNA1P35221 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC15.18■□□□□ 0.02
CTNNA1P35221 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTNNA1P35221 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTNNA1P35221 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.18■□□□□ 0.02
CTNNA1P35221 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CTNNA1P35221 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTNNA1P35221 TP73-207ENST00000378290 1831 ntTSL 2 BASIC15.18■□□□□ 0.02
CTNNA1P35221 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.18■□□□□ 0.02
CTNNA1P35221 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTNNA1P35221 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTNNA1P35221 CNN2P8-201ENST00000421872 913 ntBASIC15.18■□□□□ 0.02
CTNNA1P35221 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.18■□□□□ 0.02
CTNNA1P35221 BCRP2-202ENST00000447763 634 ntBASIC15.18■□□□□ 0.02
CTNNA1P35221 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CTNNA1P35221 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.18■□□□□ 0.02
CTNNA1P35221 FTH1P14-201ENST00000482930 551 ntBASIC15.18■□□□□ 0.02
CTNNA1P35221 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.18■□□□□ 0.02
CTNNA1P35221 BCRP6-201ENST00000510112 632 ntBASIC15.18■□□□□ 0.02
CTNNA1P35221 BCRP7-201ENST00000511549 544 ntBASIC15.18■□□□□ 0.02
CTNNA1P35221 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.18■□□□□ 0.02
CTNNA1P35221 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CTNNA1P35221 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.18■□□□□ 0.02
CTNNA1P35221 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.18■□□□□ 0.02
CTNNA1P35221 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.18■□□□□ 0.02
CTNNA1P35221 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.18■□□□□ 0.02
CTNNA1P35221 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTNNA1P35221 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTNNA1P35221 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CTNNA1P35221 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC15.18■□□□□ 0.02
CTNNA1P35221 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
CTNNA1P35221 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTNNA1P35221 NCLP1-201ENST00000445357 1963 ntBASIC15.18■□□□□ 0.02
CTNNA1P35221 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC15.18■□□□□ 0.02
CTNNA1P35221 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CTNNA1P35221 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.18■□□□□ 0.02
CTNNA1P35221 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CTNNA1P35221 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC15.18■□□□□ 0.02
CTNNA1P35221 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
CTNNA1P35221 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTNNA1P35221 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTNNA1P35221 OS9-218ENST00000551035 2246 ntTSL 2 BASIC15.17■□□□□ 0.02
CTNNA1P35221 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTNNA1P35221 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTNNA1P35221 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTNNA1P35221 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTNNA1P35221 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTNNA1P35221 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTNNA1P35221 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.17■□□□□ 0.02
CTNNA1P35221 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTNNA1P35221 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CTNNA1P35221 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTNNA1P35221 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTNNA1P35221 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTNNA1P35221 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTNNA1P35221 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTNNA1P35221 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTNNA1P35221 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTNNA1P35221 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms