Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MARK2P16-201ENST00000605714 1723 ntBASIC16.62■□□□□ 0.25
ERCC3P19447 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ERCC3P19447 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ERCC3P19447 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC3P19447 KHSRPP1-201ENST00000427983 1768 ntBASIC16.62■□□□□ 0.25
ERCC3P19447 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.62■□□□□ 0.25
ERCC3P19447 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC3P19447 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC3P19447 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
ERCC3P19447 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC3P19447 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC3P19447 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.62■□□□□ 0.25
ERCC3P19447 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.62■□□□□ 0.25
ERCC3P19447 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.62■□□□□ 0.25
ERCC3P19447 RPL13AP19-201ENST00000434320 584 ntBASIC16.62■□□□□ 0.25
ERCC3P19447 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.62■□□□□ 0.25
ERCC3P19447 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.62■□□□□ 0.25
ERCC3P19447 RN7SL81P-201ENST00000493781 261 ntBASIC16.62■□□□□ 0.25
ERCC3P19447 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC3P19447 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC16.62■□□□□ 0.25
ERCC3P19447 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.62■□□□□ 0.25
ERCC3P19447 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.62■□□□□ 0.25
ERCC3P19447 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC3P19447 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.62■□□□□ 0.25
ERCC3P19447 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC3P19447 AP001184.1-201ENST00000637936 376 ntBASIC16.62■□□□□ 0.25
ERCC3P19447 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC3P19447 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.62■□□□□ 0.25
ERCC3P19447 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.62■□□□□ 0.25
ERCC3P19447 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC3P19447 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
ERCC3P19447 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
ERCC3P19447 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC3P19447 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
ERCC3P19447 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC3P19447 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ERCC3P19447 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC3P19447 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC3P19447 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ERCC3P19447 OR2I1P-209ENST00000641730 5365 ntBASIC16.61■□□□□ 0.25
ERCC3P19447 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC3P19447 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC3P19447 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.61■□□□□ 0.25
ERCC3P19447 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.61■□□□□ 0.25
ERCC3P19447 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ERCC3P19447 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.61■□□□□ 0.25
ERCC3P19447 AP002353.1-201ENST00000528257 1599 ntBASIC16.61■□□□□ 0.25
ERCC3P19447 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC3P19447 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.61■□□□□ 0.25
ERCC3P19447 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC3P19447 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ERCC3P19447 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC3P19447 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.61■□□□□ 0.25
ERCC3P19447 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.61■□□□□ 0.25
ERCC3P19447 AL627389.1-201ENST00000413508 1182 ntBASIC16.61■□□□□ 0.25
ERCC3P19447 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.61■□□□□ 0.25
ERCC3P19447 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.61■□□□□ 0.25
ERCC3P19447 RN7SL277P-201ENST00000481521 288 ntBASIC16.61■□□□□ 0.25
ERCC3P19447 ORAOV1P1-201ENST00000503108 395 ntBASIC16.61■□□□□ 0.25
ERCC3P19447 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC3P19447 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.61■□□□□ 0.25
ERCC3P19447 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.61■□□□□ 0.25
ERCC3P19447 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.61■□□□□ 0.25
ERCC3P19447 MIR6858-201ENST00000620733 67 ntBASIC16.61■□□□□ 0.25
ERCC3P19447 AL161773.1-201ENST00000624845 863 ntBASIC16.61■□□□□ 0.25
ERCC3P19447 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.61■□□□□ 0.25
ERCC3P19447 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ERCC3P19447 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.61■□□□□ 0.25
ERCC3P19447 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.61■□□□□ 0.25
ERCC3P19447 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC3P19447 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.61■□□□□ 0.25
ERCC3P19447 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ERCC3P19447 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ERCC3P19447 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC3P19447 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC3P19447 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC3P19447 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.61■□□□□ 0.25
ERCC3P19447 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ERCC3P19447 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC3P19447 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
ERCC3P19447 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ERCC3P19447 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC3P19447 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
ERCC3P19447 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC3P19447 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.61■□□□□ 0.25
ERCC3P19447 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ERCC3P19447 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.61■□□□□ 0.25
ERCC3P19447 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.6■□□□□ 0.25
ERCC3P19447 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC3P19447 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.6■□□□□ 0.25
ERCC3P19447 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.6■□□□□ 0.25
ERCC3P19447 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC3P19447 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC3P19447 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.6■□□□□ 0.25
ERCC3P19447 AC015688.4-201ENST00000580780 1647 ntBASIC16.6■□□□□ 0.25
ERCC3P19447 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC3P19447 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC3P19447 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC3P19447 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.6■□□□□ 0.25
ERCC3P19447 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms