Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 MIR3615-201ENST00000581999 87 ntBASIC14.73□□□□□ -0.05
ERCC2P18074 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
ERCC2P18074 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
ERCC2P18074 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ERCC2P18074 AC026740.1-201ENST00000607068 791 ntBASIC14.73□□□□□ -0.05
ERCC2P18074 AC138649.2-201ENST00000615886 705 ntBASIC14.73□□□□□ -0.05
ERCC2P18074 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
ERCC2P18074 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
ERCC2P18074 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERCC2P18074 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERCC2P18074 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.73□□□□□ -0.05
ERCC2P18074 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.73□□□□□ -0.05
ERCC2P18074 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.73□□□□□ -0.05
ERCC2P18074 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERCC2P18074 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
ERCC2P18074 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.73□□□□□ -0.05
ERCC2P18074 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
ERCC2P18074 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ERCC2P18074 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERCC2P18074 AL928654.5-201ENST00000624831 2501 ntBASIC14.72□□□□□ -0.05
ERCC2P18074 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
ERCC2P18074 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERCC2P18074 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ERCC2P18074 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERCC2P18074 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.72□□□□□ -0.05
ERCC2P18074 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.72□□□□□ -0.05
ERCC2P18074 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERCC2P18074 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERCC2P18074 KRT8P21-201ENST00000430398 1491 ntBASIC14.72□□□□□ -0.05
ERCC2P18074 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERCC2P18074 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ERCC2P18074 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ERCC2P18074 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERCC2P18074 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.72□□□□□ -0.05
ERCC2P18074 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.72□□□□□ -0.05
ERCC2P18074 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.72□□□□□ -0.05
ERCC2P18074 MIR3188-201ENST00000583494 85 ntBASIC14.72□□□□□ -0.05
ERCC2P18074 AL645939.5-201ENST00000606834 243 ntBASIC14.72□□□□□ -0.05
ERCC2P18074 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.72□□□□□ -0.05
ERCC2P18074 AC023794.5-201ENST00000564380 2157 ntBASIC14.72□□□□□ -0.05
ERCC2P18074 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERCC2P18074 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.72□□□□□ -0.05
ERCC2P18074 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.72□□□□□ -0.05
ERCC2P18074 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERCC2P18074 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERCC2P18074 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
ERCC2P18074 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
ERCC2P18074 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERCC2P18074 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERCC2P18074 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.72□□□□□ -0.05
ERCC2P18074 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.72□□□□□ -0.05
ERCC2P18074 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERCC2P18074 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERCC2P18074 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
ERCC2P18074 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ERCC2P18074 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
ERCC2P18074 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERCC2P18074 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ERCC2P18074 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERCC2P18074 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERCC2P18074 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERCC2P18074 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERCC2P18074 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.71□□□□□ -0.05
ERCC2P18074 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
ERCC2P18074 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ERCC2P18074 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERCC2P18074 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
ERCC2P18074 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.71□□□□□ -0.05
ERCC2P18074 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
ERCC2P18074 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERCC2P18074 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
ERCC2P18074 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERCC2P18074 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ERCC2P18074 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
ERCC2P18074 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.71□□□□□ -0.05
ERCC2P18074 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERCC2P18074 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERCC2P18074 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERCC2P18074 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERCC2P18074 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ERCC2P18074 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ERCC2P18074 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ERCC2P18074 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.71□□□□□ -0.05
ERCC2P18074 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.71□□□□□ -0.05
ERCC2P18074 RN7SL277P-201ENST00000481521 288 ntBASIC14.71□□□□□ -0.05
ERCC2P18074 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.71□□□□□ -0.05
ERCC2P18074 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ERCC2P18074 AL805961.1-203ENST00000641078 1258 ntBASIC14.71□□□□□ -0.05
ERCC2P18074 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERCC2P18074 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERCC2P18074 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERCC2P18074 LINC01815-202ENST00000641468 1409 ntBASIC14.71□□□□□ -0.05
ERCC2P18074 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.71□□□□□ -0.05
ERCC2P18074 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERCC2P18074 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERCC2P18074 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ERCC2P18074 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ERCC2P18074 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.71□□□□□ -0.06
ERCC2P18074 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ERCC2P18074 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms