Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DOBP13765 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DOBP13765 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DOBP13765 AC018629.1-201ENST00000623381 1736 ntBASIC12.86□□□□□ -0.35
HLA-DOBP13765 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DOBP13765 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DOBP13765 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DOBP13765 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DOBP13765 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 RPS2P32-201ENST00000439199 892 ntBASIC12.86□□□□□ -0.35
HLA-DOBP13765 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 OR2R1P-201ENST00000441404 914 ntBASIC12.86□□□□□ -0.35
HLA-DOBP13765 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.86□□□□□ -0.35
HLA-DOBP13765 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DOBP13765 TMEM198B-204ENST00000484016 896 ntBASIC12.86□□□□□ -0.35
HLA-DOBP13765 HLA-J-204ENST00000495278 958 ntBASIC12.86□□□□□ -0.35
HLA-DOBP13765 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 AC022217.1-201ENST00000521069 738 ntBASIC12.86□□□□□ -0.35
HLA-DOBP13765 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 AC007663.3-201ENST00000609632 465 ntBASIC12.86□□□□□ -0.35
HLA-DOBP13765 AL008721.1-201ENST00000609964 604 ntBASIC12.86□□□□□ -0.35
HLA-DOBP13765 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 AL023803.2-201ENST00000620080 638 ntBASIC12.86□□□□□ -0.35
HLA-DOBP13765 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DOBP13765 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.86□□□□□ -0.35
HLA-DOBP13765 AL033527.4-201ENST00000641026 673 ntBASIC12.86□□□□□ -0.35
HLA-DOBP13765 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DOBP13765 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DOBP13765 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DOBP13765 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DOBP13765 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DOBP13765 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DOBP13765 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DOBP13765 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DOBP13765 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DOBP13765 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DOBP13765 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DOBP13765 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DOBP13765 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 CCT8L1P-201ENST00000465400 1674 ntBASIC12.86□□□□□ -0.35
HLA-DOBP13765 TUBB1P2-201ENST00000422712 1306 ntBASIC12.86□□□□□ -0.35
HLA-DOBP13765 TUBB1P1-201ENST00000503144 1300 ntBASIC12.86□□□□□ -0.35
HLA-DOBP13765 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.86□□□□□ -0.35
HLA-DOBP13765 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DOBP13765 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DOBP13765 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.85□□□□□ -0.35
HLA-DOBP13765 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DOBP13765 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.85□□□□□ -0.35
HLA-DOBP13765 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DOBP13765 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.85□□□□□ -0.35
HLA-DOBP13765 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
HLA-DOBP13765 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DOBP13765 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DOBP13765 FAM90A12P-201ENST00000519497 2375 ntBASIC12.85□□□□□ -0.35
HLA-DOBP13765 FAM90A24P-201ENST00000520792 2369 ntBASIC12.85□□□□□ -0.35
HLA-DOBP13765 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
HLA-DOBP13765 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DOBP13765 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DOBP13765 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DOBP13765 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DOBP13765 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DOBP13765 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DOBP13765 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DOBP13765 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DOBP13765 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.85□□□□□ -0.35
HLA-DOBP13765 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
HLA-DOBP13765 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.85□□□□□ -0.35
HLA-DOBP13765 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.85□□□□□ -0.35
HLA-DOBP13765 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
HLA-DOBP13765 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.85□□□□□ -0.35
HLA-DOBP13765 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.85□□□□□ -0.35
HLA-DOBP13765 AC104073.2-201ENST00000453737 312 ntBASIC12.85□□□□□ -0.35
HLA-DOBP13765 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.85□□□□□ -0.35
HLA-DOBP13765 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC12.85□□□□□ -0.35
HLA-DOBP13765 AC091271.1-201ENST00000611877 1162 ntBASIC12.85□□□□□ -0.35
HLA-DOBP13765 AC090386.2-201ENST00000623010 1039 ntBASIC12.85□□□□□ -0.35
HLA-DOBP13765 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DOBP13765 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DOBP13765 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms