Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCNAP12004 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCNAP12004 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCNAP12004 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCNAP12004 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.06□□□□□ -0.16
PCNAP12004 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCNAP12004 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.06□□□□□ -0.16
PCNAP12004 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.06□□□□□ -0.16
PCNAP12004 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.06□□□□□ -0.16
PCNAP12004 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.06□□□□□ -0.16
PCNAP12004 SNX29P1-201ENST00000548357 1007 ntBASIC14.06□□□□□ -0.16
PCNAP12004 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PCNAP12004 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.06□□□□□ -0.16
PCNAP12004 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.06□□□□□ -0.16
PCNAP12004 AC008825.2-201ENST00000603374 718 ntBASIC14.06□□□□□ -0.16
PCNAP12004 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.06□□□□□ -0.16
PCNAP12004 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PCNAP12004 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.06□□□□□ -0.16
PCNAP12004 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.06□□□□□ -0.16
PCNAP12004 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCNAP12004 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCNAP12004 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCNAP12004 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PCNAP12004 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCNAP12004 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.06□□□□□ -0.16
PCNAP12004 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.06□□□□□ -0.16
PCNAP12004 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PCNAP12004 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCNAP12004 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCNAP12004 E2F3P2-201ENST00000447755 1422 ntBASIC14.06□□□□□ -0.16
PCNAP12004 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.06□□□□□ -0.16
PCNAP12004 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.06□□□□□ -0.16
PCNAP12004 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
PCNAP12004 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.05□□□□□ -0.16
PCNAP12004 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.05□□□□□ -0.16
PCNAP12004 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCNAP12004 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
PCNAP12004 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCNAP12004 KRT8P24-201ENST00000560290 1559 ntBASIC14.05□□□□□ -0.16
PCNAP12004 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCNAP12004 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCNAP12004 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
PCNAP12004 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCNAP12004 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCNAP12004 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.05□□□□□ -0.16
PCNAP12004 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
PCNAP12004 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.05□□□□□ -0.16
PCNAP12004 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCNAP12004 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.05□□□□□ -0.16
PCNAP12004 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.05□□□□□ -0.16
PCNAP12004 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCNAP12004 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCNAP12004 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCNAP12004 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCNAP12004 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCNAP12004 ANKRD19P-201ENST00000338192 862 ntBASIC14.05□□□□□ -0.16
PCNAP12004 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.05□□□□□ -0.16
PCNAP12004 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.05□□□□□ -0.16
PCNAP12004 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
PCNAP12004 MIR1909-201ENST00000411312 80 ntBASIC14.05□□□□□ -0.16
PCNAP12004 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.05□□□□□ -0.16
PCNAP12004 GPR53P-205ENST00000457298 1084 ntBASIC14.05□□□□□ -0.16
PCNAP12004 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.05□□□□□ -0.16
PCNAP12004 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.05□□□□□ -0.16
PCNAP12004 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.05□□□□□ -0.16
PCNAP12004 AC005586.2-201ENST00000563946 837 ntBASIC14.05□□□□□ -0.16
PCNAP12004 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.05□□□□□ -0.16
PCNAP12004 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC14.05□□□□□ -0.16
PCNAP12004 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCNAP12004 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.05□□□□□ -0.16
PCNAP12004 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCNAP12004 AC027612.1-201ENST00000445234 2395 ntBASIC14.05□□□□□ -0.16
PCNAP12004 AC063926.2-201ENST00000623766 1308 ntBASIC14.05□□□□□ -0.16
PCNAP12004 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCNAP12004 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PCNAP12004 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCNAP12004 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCNAP12004 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.05□□□□□ -0.16
PCNAP12004 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCNAP12004 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.05□□□□□ -0.16
PCNAP12004 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.05□□□□□ -0.16
PCNAP12004 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.04□□□□□ -0.16
PCNAP12004 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.04□□□□□ -0.16
PCNAP12004 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.04□□□□□ -0.16
PCNAP12004 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCNAP12004 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCNAP12004 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.04□□□□□ -0.16
PCNAP12004 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCNAP12004 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCNAP12004 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCNAP12004 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PCNAP12004 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
PCNAP12004 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCNAP12004 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCNAP12004 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PCNAP12004 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.04□□□□□ -0.16
PCNAP12004 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCNAP12004 AC019294.4-201ENST00000561777 2905 ntBASIC14.04□□□□□ -0.16
PCNAP12004 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCNAP12004 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms