Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM1P09493 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.87■□□□□ 0.13
TPM1P09493 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TPM1P09493 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.87■□□□□ 0.13
TPM1P09493 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TPM1P09493 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TPM1P09493 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC15.87■□□□□ 0.13
TPM1P09493 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC15.87■□□□□ 0.13
TPM1P09493 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TPM1P09493 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 MRPS18AP1-201ENST00000414458 589 ntBASIC15.87■□□□□ 0.13
TPM1P09493 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 AL161932.2-201ENST00000435436 679 ntBASIC15.87■□□□□ 0.13
TPM1P09493 AL162726.2-201ENST00000438986 1017 ntBASIC15.87■□□□□ 0.13
TPM1P09493 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.87■□□□□ 0.13
TPM1P09493 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.87■□□□□ 0.13
TPM1P09493 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 AC068587.3-201ENST00000526613 355 ntBASIC15.87■□□□□ 0.13
TPM1P09493 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.87■□□□□ 0.13
TPM1P09493 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 AC009486.1-201ENST00000569860 813 ntBASIC15.87■□□□□ 0.13
TPM1P09493 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.87■□□□□ 0.13
TPM1P09493 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.87■□□□□ 0.13
TPM1P09493 AP001160.2-201ENST00000596071 487 ntBASIC15.87■□□□□ 0.13
TPM1P09493 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.87■□□□□ 0.13
TPM1P09493 ENPP7P14-201ENST00000621765 1040 ntBASIC15.87■□□□□ 0.13
TPM1P09493 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.87■□□□□ 0.13
TPM1P09493 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TPM1P09493 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TPM1P09493 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC15.87■□□□□ 0.13
TPM1P09493 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TPM1P09493 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TPM1P09493 TSN-212ENST00000536142 3328 ntTSL 2 BASIC15.87■□□□□ 0.13
TPM1P09493 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TPM1P09493 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM1P09493 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM1P09493 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM1P09493 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC15.86■□□□□ 0.13
TPM1P09493 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM1P09493 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM1P09493 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM1P09493 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.86■□□□□ 0.13
TPM1P09493 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TPM1P09493 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TPM1P09493 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM1P09493 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TPM1P09493 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM1P09493 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM1P09493 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC15.86■□□□□ 0.13
TPM1P09493 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TPM1P09493 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM1P09493 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TPM1P09493 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM1P09493 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM1P09493 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM1P09493 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TPM1P09493 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM1P09493 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TPM1P09493 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM1P09493 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.86■□□□□ 0.13
TPM1P09493 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.86■□□□□ 0.13
TPM1P09493 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.86■□□□□ 0.13
TPM1P09493 DFFBP1-201ENST00000433250 979 ntBASIC15.86■□□□□ 0.13
TPM1P09493 METTL21AP1-201ENST00000438852 635 ntBASIC15.86■□□□□ 0.13
TPM1P09493 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.86■□□□□ 0.13
TPM1P09493 MYCLP2-201ENST00000449268 967 ntBASIC15.86■□□□□ 0.13
TPM1P09493 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.86■□□□□ 0.13
TPM1P09493 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.86■□□□□ 0.13
TPM1P09493 AC022137.2-201ENST00000503482 481 ntBASIC15.86■□□□□ 0.13
TPM1P09493 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
TPM1P09493 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.86■□□□□ 0.13
TPM1P09493 BAP1-211ENST00000615113 489 ntBASIC15.86■□□□□ 0.13
TPM1P09493 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.86■□□□□ 0.13
TPM1P09493 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TPM1P09493 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM1P09493 KRT18P28-201ENST00000453838 1332 ntBASIC15.86■□□□□ 0.13
TPM1P09493 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TPM1P09493 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms