Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SFTPBP07988 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
SFTPBP07988 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.58□□□□□ -0.4
SFTPBP07988 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.57□□□□□ -0.4
SFTPBP07988 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 MIR497HG-202ENST00000572453 3838 ntBASIC12.57□□□□□ -0.4
SFTPBP07988 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.57□□□□□ -0.4
SFTPBP07988 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
SFTPBP07988 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.57□□□□□ -0.4
SFTPBP07988 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SFTPBP07988 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
SFTPBP07988 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SFTPBP07988 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SFTPBP07988 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
SFTPBP07988 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.57□□□□□ -0.4
SFTPBP07988 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.57□□□□□ -0.4
SFTPBP07988 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.57□□□□□ -0.4
SFTPBP07988 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.57□□□□□ -0.4
SFTPBP07988 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.57□□□□□ -0.4
SFTPBP07988 AC016694.1-201ENST00000434179 700 ntBASIC12.57□□□□□ -0.4
SFTPBP07988 RPS2P32-201ENST00000439199 892 ntBASIC12.57□□□□□ -0.4
SFTPBP07988 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.57□□□□□ -0.4
SFTPBP07988 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.57□□□□□ -0.4
SFTPBP07988 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.57□□□□□ -0.4
SFTPBP07988 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
SFTPBP07988 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 MESTP3-201ENST00000503460 968 ntBASIC12.57□□□□□ -0.4
SFTPBP07988 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SFTPBP07988 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.57□□□□□ -0.4
SFTPBP07988 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC12.57□□□□□ -0.4
SFTPBP07988 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.57□□□□□ -0.4
SFTPBP07988 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.57□□□□□ -0.4
SFTPBP07988 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SFTPBP07988 GNRHR2-203ENST00000581100 1187 ntBASIC12.57□□□□□ -0.4
SFTPBP07988 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.57□□□□□ -0.4
SFTPBP07988 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 AC020910.6-201ENST00000623084 1459 ntBASIC12.57□□□□□ -0.4
SFTPBP07988 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.57□□□□□ -0.4
SFTPBP07988 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.57□□□□□ -0.4
SFTPBP07988 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.57□□□□□ -0.4
SFTPBP07988 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SFTPBP07988 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SFTPBP07988 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.57□□□□□ -0.4
SFTPBP07988 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.57□□□□□ -0.4
SFTPBP07988 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SFTPBP07988 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.57□□□□□ -0.4
SFTPBP07988 AL023775.1-201ENST00000454907 1746 ntBASIC12.57□□□□□ -0.4
SFTPBP07988 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.57□□□□□ -0.4
SFTPBP07988 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SFTPBP07988 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SFTPBP07988 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SFTPBP07988 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SFTPBP07988 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.56□□□□□ -0.4
SFTPBP07988 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SFTPBP07988 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.56□□□□□ -0.4
SFTPBP07988 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SFTPBP07988 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SFTPBP07988 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SFTPBP07988 AL805961.2-201ENST00000642139 4817 ntBASIC12.56□□□□□ -0.4
SFTPBP07988 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SFTPBP07988 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SFTPBP07988 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SFTPBP07988 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms