Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 AL445250.1-201ENST00000641671 2259 ntBASIC12.3□□□□□ -0.44
TMEM235A6NFC5 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 HLA-DRB6-201ENST00000411500 1235 ntBASIC12.3□□□□□ -0.44
TMEM235A6NFC5 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 AC138466.3-201ENST00000619983 221 ntBASIC12.3□□□□□ -0.44
TMEM235A6NFC5 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 MIR193BHG-211ENST00000641433 5365 ntBASIC12.3□□□□□ -0.44
TMEM235A6NFC5 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.3□□□□□ -0.44
TMEM235A6NFC5 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 MKRN5P-201ENST00000445263 1467 ntBASIC12.29□□□□□ -0.44
TMEM235A6NFC5 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 POM121L8P-201ENST00000417732 1281 ntBASIC12.29□□□□□ -0.44
TMEM235A6NFC5 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 POM121L9P-203ENST00000441984 1285 ntBASIC12.29□□□□□ -0.44
TMEM235A6NFC5 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.29□□□□□ -0.44
TMEM235A6NFC5 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 AL391280.1-201ENST00000506969 1062 ntBASIC12.29□□□□□ -0.44
TMEM235A6NFC5 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.29□□□□□ -0.44
TMEM235A6NFC5 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms