Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
CLCA3PQ9Y6N3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.26■□□□□ 0.99
CLCA3PQ9Y6N3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLCA3PQ9Y6N3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CLCA3PQ9Y6N3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLCA3PQ9Y6N3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.26■□□□□ 0.99
CLCA3PQ9Y6N3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLCA3PQ9Y6N3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CLCA3PQ9Y6N3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.26■□□□□ 0.99
CLCA3PQ9Y6N3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLCA3PQ9Y6N3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CLCA3PQ9Y6N3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.26■□□□□ 0.99
CLCA3PQ9Y6N3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.25■□□□□ 0.99
CLCA3PQ9Y6N3 AC004812.2-201ENST00000611079 2094 ntBASIC21.25■□□□□ 0.99
CLCA3PQ9Y6N3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLCA3PQ9Y6N3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLCA3PQ9Y6N3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLCA3PQ9Y6N3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.24■□□□□ 0.99
CLCA3PQ9Y6N3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CLCA3PQ9Y6N3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLCA3PQ9Y6N3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.24■□□□□ 0.99
CLCA3PQ9Y6N3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CLCA3PQ9Y6N3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.24■□□□□ 0.99
CLCA3PQ9Y6N3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.24■□□□□ 0.99
CLCA3PQ9Y6N3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLCA3PQ9Y6N3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLCA3PQ9Y6N3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLCA3PQ9Y6N3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLCA3PQ9Y6N3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLCA3PQ9Y6N3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLCA3PQ9Y6N3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.23■□□□□ 0.99
CLCA3PQ9Y6N3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLCA3PQ9Y6N3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.23■□□□□ 0.99
CLCA3PQ9Y6N3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.23■□□□□ 0.99
CLCA3PQ9Y6N3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.23■□□□□ 0.99
CLCA3PQ9Y6N3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.23■□□□□ 0.99
CLCA3PQ9Y6N3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.23■□□□□ 0.99
CLCA3PQ9Y6N3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.23■□□□□ 0.99
CLCA3PQ9Y6N3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.23■□□□□ 0.99
CLCA3PQ9Y6N3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLCA3PQ9Y6N3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLCA3PQ9Y6N3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CLCA3PQ9Y6N3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLCA3PQ9Y6N3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.22■□□□□ 0.99
CLCA3PQ9Y6N3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCA3PQ9Y6N3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCA3PQ9Y6N3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCA3PQ9Y6N3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.22■□□□□ 0.99
CLCA3PQ9Y6N3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.22■□□□□ 0.99
CLCA3PQ9Y6N3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
CLCA3PQ9Y6N3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
CLCA3PQ9Y6N3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLCA3PQ9Y6N3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCA3PQ9Y6N3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCA3PQ9Y6N3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCA3PQ9Y6N3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCA3PQ9Y6N3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCA3PQ9Y6N3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CLCA3PQ9Y6N3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.21■□□□□ 0.99
CLCA3PQ9Y6N3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLCA3PQ9Y6N3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.21■□□□□ 0.99
CLCA3PQ9Y6N3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.21■□□□□ 0.99
CLCA3PQ9Y6N3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.21■□□□□ 0.99
CLCA3PQ9Y6N3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCA3PQ9Y6N3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.21■□□□□ 0.99
CLCA3PQ9Y6N3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLCA3PQ9Y6N3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCA3PQ9Y6N3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
CLCA3PQ9Y6N3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCA3PQ9Y6N3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLCA3PQ9Y6N3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLCA3PQ9Y6N3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLCA3PQ9Y6N3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLCA3PQ9Y6N3 AC012676.1-201ENST00000574705 1949 ntBASIC21.2■□□□□ 0.98
CLCA3PQ9Y6N3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.2■□□□□ 0.98
CLCA3PQ9Y6N3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CLCA3PQ9Y6N3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLCA3PQ9Y6N3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.2■□□□□ 0.98
CLCA3PQ9Y6N3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLCA3PQ9Y6N3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLCA3PQ9Y6N3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLCA3PQ9Y6N3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLCA3PQ9Y6N3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.19■□□□□ 0.98
CLCA3PQ9Y6N3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLCA3PQ9Y6N3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.19■□□□□ 0.98
CLCA3PQ9Y6N3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.19■□□□□ 0.98
CLCA3PQ9Y6N3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLCA3PQ9Y6N3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLCA3PQ9Y6N3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.19■□□□□ 0.98
CLCA3PQ9Y6N3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLCA3PQ9Y6N3 AC008406.3-201ENST00000620001 1374 ntBASIC21.19■□□□□ 0.98
CLCA3PQ9Y6N3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.19■□□□□ 0.98
CLCA3PQ9Y6N3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLCA3PQ9Y6N3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLCA3PQ9Y6N3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCA3PQ9Y6N3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCA3PQ9Y6N3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.18■□□□□ 0.98
CLCA3PQ9Y6N3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.18■□□□□ 0.98
CLCA3PQ9Y6N3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CLCA3PQ9Y6N3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms