Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.7■■□□□ 1.54
PCDHA11Q9Y5I1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA11Q9Y5I1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.69■■□□□ 1.54
PCDHA11Q9Y5I1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.69■■□□□ 1.54
PCDHA11Q9Y5I1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.69■■□□□ 1.54
PCDHA11Q9Y5I1 AL358852.1-201ENST00000623174 1268 ntBASIC24.69■■□□□ 1.54
PCDHA11Q9Y5I1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA11Q9Y5I1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA11Q9Y5I1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA11Q9Y5I1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
PCDHA11Q9Y5I1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA11Q9Y5I1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA11Q9Y5I1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA11Q9Y5I1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC24.68■■□□□ 1.54
PCDHA11Q9Y5I1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.68■■□□□ 1.54
PCDHA11Q9Y5I1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.68■■□□□ 1.54
PCDHA11Q9Y5I1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA11Q9Y5I1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
PCDHA11Q9Y5I1 TSPY26P-201ENST00000476365 1326 ntBASIC24.67■■□□□ 1.54
PCDHA11Q9Y5I1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHA11Q9Y5I1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
PCDHA11Q9Y5I1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHA11Q9Y5I1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDHA11Q9Y5I1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
PCDHA11Q9Y5I1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
PCDHA11Q9Y5I1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.67■■□□□ 1.54
PCDHA11Q9Y5I1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDHA11Q9Y5I1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDHA11Q9Y5I1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
PCDHA11Q9Y5I1 AC096887.2-201ENST00000623443 1957 ntBASIC24.67■■□□□ 1.54
PCDHA11Q9Y5I1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
PCDHA11Q9Y5I1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.66■■□□□ 1.54
PCDHA11Q9Y5I1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHA11Q9Y5I1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHA11Q9Y5I1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
PCDHA11Q9Y5I1 GXYLT1P2-201ENST00000433312 1230 ntBASIC24.65■■□□□ 1.54
PCDHA11Q9Y5I1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.65■■□□□ 1.54
PCDHA11Q9Y5I1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.65■■□□□ 1.54
PCDHA11Q9Y5I1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHA11Q9Y5I1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
PCDHA11Q9Y5I1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHA11Q9Y5I1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHA11Q9Y5I1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.64■■□□□ 1.54
PCDHA11Q9Y5I1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.64■■□□□ 1.54
PCDHA11Q9Y5I1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.64■■□□□ 1.54
PCDHA11Q9Y5I1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
PCDHA11Q9Y5I1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHA11Q9Y5I1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHA11Q9Y5I1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHA11Q9Y5I1 ERN1-208ENST00000606895 2068 ntBASIC24.64■■□□□ 1.53
PCDHA11Q9Y5I1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
PCDHA11Q9Y5I1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
PCDHA11Q9Y5I1 AC010501.1-201ENST00000606270 1962 ntBASIC24.63■■□□□ 1.53
PCDHA11Q9Y5I1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
PCDHA11Q9Y5I1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA11Q9Y5I1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA11Q9Y5I1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA11Q9Y5I1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC24.63■■□□□ 1.53
PCDHA11Q9Y5I1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.62■■□□□ 1.53
PCDHA11Q9Y5I1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA11Q9Y5I1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA11Q9Y5I1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA11Q9Y5I1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA11Q9Y5I1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA11Q9Y5I1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA11Q9Y5I1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC24.62■■□□□ 1.53
PCDHA11Q9Y5I1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.62■■□□□ 1.53
PCDHA11Q9Y5I1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.62■■□□□ 1.53
PCDHA11Q9Y5I1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.62■■□□□ 1.53
PCDHA11Q9Y5I1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA11Q9Y5I1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA11Q9Y5I1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDHA11Q9Y5I1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA11Q9Y5I1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA11Q9Y5I1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA11Q9Y5I1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDHA11Q9Y5I1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
PCDHA11Q9Y5I1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA11Q9Y5I1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA11Q9Y5I1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.6■■□□□ 1.53
PCDHA11Q9Y5I1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC24.6■■□□□ 1.53
PCDHA11Q9Y5I1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA11Q9Y5I1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA11Q9Y5I1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA11Q9Y5I1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.6■■□□□ 1.53
PCDHA11Q9Y5I1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
PCDHA11Q9Y5I1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.59■■□□□ 1.53
PCDHA11Q9Y5I1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHA11Q9Y5I1 CCDC92B-201ENST00000575506 885 ntBASIC24.59■■□□□ 1.53
PCDHA11Q9Y5I1 NTF6G-201ENST00000591094 616 ntBASIC24.59■■□□□ 1.53
PCDHA11Q9Y5I1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.59■■□□□ 1.53
PCDHA11Q9Y5I1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
PCDHA11Q9Y5I1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHA11Q9Y5I1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHA11Q9Y5I1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.58■■□□□ 1.53
PCDHA11Q9Y5I1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
PCDHA11Q9Y5I1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHA11Q9Y5I1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHA11Q9Y5I1 HLA-L-209ENST00000420110 1011 ntBASIC24.58■■□□□ 1.53
PCDHA11Q9Y5I1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms