Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MRPS28Q9Y2Q9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
MRPS28Q9Y2Q9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MRPS28Q9Y2Q9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.41■□□□□ 0.7
MRPS28Q9Y2Q9 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MRPS28Q9Y2Q9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MRPS28Q9Y2Q9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MRPS28Q9Y2Q9 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MRPS28Q9Y2Q9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MRPS28Q9Y2Q9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
MRPS28Q9Y2Q9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MRPS28Q9Y2Q9 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
MRPS28Q9Y2Q9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MRPS28Q9Y2Q9 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
MRPS28Q9Y2Q9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MRPS28Q9Y2Q9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MRPS28Q9Y2Q9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MRPS28Q9Y2Q9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MRPS28Q9Y2Q9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MRPS28Q9Y2Q9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
MRPS28Q9Y2Q9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MRPS28Q9Y2Q9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.39■□□□□ 0.69
MRPS28Q9Y2Q9 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.39■□□□□ 0.69
MRPS28Q9Y2Q9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MRPS28Q9Y2Q9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.39■□□□□ 0.69
MRPS28Q9Y2Q9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MRPS28Q9Y2Q9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.39■□□□□ 0.69
MRPS28Q9Y2Q9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MRPS28Q9Y2Q9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MRPS28Q9Y2Q9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
MRPS28Q9Y2Q9 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
MRPS28Q9Y2Q9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
MRPS28Q9Y2Q9 EP400NL-214ENST00000641289 2402 ntBASIC19.39■□□□□ 0.69
MRPS28Q9Y2Q9 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MRPS28Q9Y2Q9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
MRPS28Q9Y2Q9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MRPS28Q9Y2Q9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MRPS28Q9Y2Q9 KRT18P60-201ENST00000312876 1297 ntBASIC19.38■□□□□ 0.69
MRPS28Q9Y2Q9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MRPS28Q9Y2Q9 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MRPS28Q9Y2Q9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
MRPS28Q9Y2Q9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MRPS28Q9Y2Q9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MRPS28Q9Y2Q9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
MRPS28Q9Y2Q9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MRPS28Q9Y2Q9 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.37■□□□□ 0.69
MRPS28Q9Y2Q9 AC022616.5-201ENST00000518796 181 ntBASIC19.37■□□□□ 0.69
MRPS28Q9Y2Q9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MRPS28Q9Y2Q9 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.37■□□□□ 0.69
MRPS28Q9Y2Q9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MRPS28Q9Y2Q9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MRPS28Q9Y2Q9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
MRPS28Q9Y2Q9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MRPS28Q9Y2Q9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MRPS28Q9Y2Q9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
MRPS28Q9Y2Q9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
MRPS28Q9Y2Q9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MRPS28Q9Y2Q9 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
MRPS28Q9Y2Q9 AC139795.1-202ENST00000500444 432 ntBASIC19.36■□□□□ 0.69
MRPS28Q9Y2Q9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.36■□□□□ 0.69
MRPS28Q9Y2Q9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MRPS28Q9Y2Q9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.35■□□□□ 0.69
MRPS28Q9Y2Q9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MRPS28Q9Y2Q9 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
MRPS28Q9Y2Q9 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
MRPS28Q9Y2Q9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MRPS28Q9Y2Q9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.35■□□□□ 0.69
MRPS28Q9Y2Q9 HSD17B1P1-201ENST00000590052 955 ntBASIC19.35■□□□□ 0.69
MRPS28Q9Y2Q9 AC019171.1-201ENST00000601251 1056 ntBASIC19.35■□□□□ 0.69
MRPS28Q9Y2Q9 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.35■□□□□ 0.69
MRPS28Q9Y2Q9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MRPS28Q9Y2Q9 GUSBP5-202ENST00000510805 1989 ntBASIC19.35■□□□□ 0.69
MRPS28Q9Y2Q9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MRPS28Q9Y2Q9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MRPS28Q9Y2Q9 PKD1P6-201ENST00000343738 4769 ntBASIC19.34■□□□□ 0.69
MRPS28Q9Y2Q9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MRPS28Q9Y2Q9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MRPS28Q9Y2Q9 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MRPS28Q9Y2Q9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.34■□□□□ 0.69
MRPS28Q9Y2Q9 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.34■□□□□ 0.69
MRPS28Q9Y2Q9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MRPS28Q9Y2Q9 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.34■□□□□ 0.69
MRPS28Q9Y2Q9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MRPS28Q9Y2Q9 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MRPS28Q9Y2Q9 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MRPS28Q9Y2Q9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.34■□□□□ 0.69
MRPS28Q9Y2Q9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.34■□□□□ 0.69
MRPS28Q9Y2Q9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.33■□□□□ 0.69
MRPS28Q9Y2Q9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.33■□□□□ 0.69
MRPS28Q9Y2Q9 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
MRPS28Q9Y2Q9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
MRPS28Q9Y2Q9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.33■□□□□ 0.68
MRPS28Q9Y2Q9 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MRPS28Q9Y2Q9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
MRPS28Q9Y2Q9 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
MRPS28Q9Y2Q9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
MRPS28Q9Y2Q9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MRPS28Q9Y2Q9 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MRPS28Q9Y2Q9 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
MRPS28Q9Y2Q9 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms