Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPH3AQ9Y2J0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPH3AQ9Y2J0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPH3AQ9Y2J0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.61■□□□□ 0.89
RPH3AQ9Y2J0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPH3AQ9Y2J0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPH3AQ9Y2J0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPH3AQ9Y2J0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPH3AQ9Y2J0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RPH3AQ9Y2J0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.6■□□□□ 0.89
RPH3AQ9Y2J0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPH3AQ9Y2J0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RPH3AQ9Y2J0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPH3AQ9Y2J0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RPH3AQ9Y2J0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RPH3AQ9Y2J0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.6■□□□□ 0.89
RPH3AQ9Y2J0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPH3AQ9Y2J0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPH3AQ9Y2J0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPH3AQ9Y2J0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPH3AQ9Y2J0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RPH3AQ9Y2J0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPH3AQ9Y2J0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
RPH3AQ9Y2J0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.59■□□□□ 0.89
RPH3AQ9Y2J0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPH3AQ9Y2J0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPH3AQ9Y2J0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.59■□□□□ 0.89
RPH3AQ9Y2J0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RPH3AQ9Y2J0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.59■□□□□ 0.89
RPH3AQ9Y2J0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.59■□□□□ 0.89
RPH3AQ9Y2J0 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.59■□□□□ 0.89
RPH3AQ9Y2J0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPH3AQ9Y2J0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RPH3AQ9Y2J0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPH3AQ9Y2J0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPH3AQ9Y2J0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
RPH3AQ9Y2J0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.58■□□□□ 0.89
RPH3AQ9Y2J0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.58■□□□□ 0.89
RPH3AQ9Y2J0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RPH3AQ9Y2J0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.58■□□□□ 0.89
RPH3AQ9Y2J0 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.58■□□□□ 0.89
RPH3AQ9Y2J0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RPH3AQ9Y2J0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RPH3AQ9Y2J0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
RPH3AQ9Y2J0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RPH3AQ9Y2J0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPH3AQ9Y2J0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPH3AQ9Y2J0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.57■□□□□ 0.88
RPH3AQ9Y2J0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPH3AQ9Y2J0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RPH3AQ9Y2J0 AL136116.3-201ENST00000402907 1138 ntBASIC20.57■□□□□ 0.88
RPH3AQ9Y2J0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.57■□□□□ 0.88
RPH3AQ9Y2J0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.57■□□□□ 0.88
RPH3AQ9Y2J0 MIR4466-201ENST00000606121 54 ntBASIC20.57■□□□□ 0.88
RPH3AQ9Y2J0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.57■□□□□ 0.88
RPH3AQ9Y2J0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.57■□□□□ 0.88
RPH3AQ9Y2J0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPH3AQ9Y2J0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RPH3AQ9Y2J0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPH3AQ9Y2J0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
RPH3AQ9Y2J0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPH3AQ9Y2J0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RPH3AQ9Y2J0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPH3AQ9Y2J0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPH3AQ9Y2J0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPH3AQ9Y2J0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPH3AQ9Y2J0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPH3AQ9Y2J0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RPH3AQ9Y2J0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPH3AQ9Y2J0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPH3AQ9Y2J0 AL512631.2-201ENST00000604634 923 ntBASIC20.55■□□□□ 0.88
RPH3AQ9Y2J0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPH3AQ9Y2J0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPH3AQ9Y2J0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.55■□□□□ 0.88
RPH3AQ9Y2J0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPH3AQ9Y2J0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.54■□□□□ 0.88
RPH3AQ9Y2J0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RPH3AQ9Y2J0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPH3AQ9Y2J0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPH3AQ9Y2J0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.54■□□□□ 0.88
RPH3AQ9Y2J0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPH3AQ9Y2J0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPH3AQ9Y2J0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.54■□□□□ 0.88
RPH3AQ9Y2J0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPH3AQ9Y2J0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPH3AQ9Y2J0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.53■□□□□ 0.88
RPH3AQ9Y2J0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPH3AQ9Y2J0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPH3AQ9Y2J0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPH3AQ9Y2J0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPH3AQ9Y2J0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RPH3AQ9Y2J0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPH3AQ9Y2J0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPH3AQ9Y2J0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPH3AQ9Y2J0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RPH3AQ9Y2J0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPH3AQ9Y2J0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.52■□□□□ 0.88
RPH3AQ9Y2J0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.52■□□□□ 0.88
RPH3AQ9Y2J0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPH3AQ9Y2J0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms