Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COPS3Q9UNS2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
COPS3Q9UNS2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
COPS3Q9UNS2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COPS3Q9UNS2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COPS3Q9UNS2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COPS3Q9UNS2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
COPS3Q9UNS2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COPS3Q9UNS2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.07■□□□□ 0.8
COPS3Q9UNS2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.07■□□□□ 0.8
COPS3Q9UNS2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COPS3Q9UNS2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
COPS3Q9UNS2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COPS3Q9UNS2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COPS3Q9UNS2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COPS3Q9UNS2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COPS3Q9UNS2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
COPS3Q9UNS2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.07■□□□□ 0.8
COPS3Q9UNS2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPS3Q9UNS2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.06■□□□□ 0.8
COPS3Q9UNS2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
COPS3Q9UNS2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPS3Q9UNS2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
COPS3Q9UNS2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPS3Q9UNS2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.06■□□□□ 0.8
COPS3Q9UNS2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.06■□□□□ 0.8
COPS3Q9UNS2 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.06■□□□□ 0.8
COPS3Q9UNS2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COPS3Q9UNS2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COPS3Q9UNS2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPS3Q9UNS2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.06■□□□□ 0.8
COPS3Q9UNS2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPS3Q9UNS2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPS3Q9UNS2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPS3Q9UNS2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPS3Q9UNS2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
COPS3Q9UNS2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPS3Q9UNS2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.05■□□□□ 0.8
COPS3Q9UNS2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPS3Q9UNS2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COPS3Q9UNS2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.05■□□□□ 0.8
COPS3Q9UNS2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.05■□□□□ 0.8
COPS3Q9UNS2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPS3Q9UNS2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.04■□□□□ 0.8
COPS3Q9UNS2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
COPS3Q9UNS2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.04■□□□□ 0.8
COPS3Q9UNS2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COPS3Q9UNS2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
COPS3Q9UNS2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPS3Q9UNS2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COPS3Q9UNS2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPS3Q9UNS2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COPS3Q9UNS2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPS3Q9UNS2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPS3Q9UNS2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPS3Q9UNS2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPS3Q9UNS2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.03■□□□□ 0.8
COPS3Q9UNS2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COPS3Q9UNS2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPS3Q9UNS2 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.03■□□□□ 0.8
COPS3Q9UNS2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.03■□□□□ 0.8
COPS3Q9UNS2 DUX4L18-201ENST00000553347 1267 ntBASIC20.03■□□□□ 0.8
COPS3Q9UNS2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPS3Q9UNS2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
COPS3Q9UNS2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPS3Q9UNS2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
COPS3Q9UNS2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COPS3Q9UNS2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COPS3Q9UNS2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COPS3Q9UNS2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.02■□□□□ 0.8
COPS3Q9UNS2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.02■□□□□ 0.8
COPS3Q9UNS2 AC019171.1-201ENST00000601251 1056 ntBASIC20.02■□□□□ 0.8
COPS3Q9UNS2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.02■□□□□ 0.8
COPS3Q9UNS2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
COPS3Q9UNS2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COPS3Q9UNS2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.02■□□□□ 0.79
COPS3Q9UNS2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
COPS3Q9UNS2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COPS3Q9UNS2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
COPS3Q9UNS2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COPS3Q9UNS2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.01■□□□□ 0.79
COPS3Q9UNS2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COPS3Q9UNS2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.01■□□□□ 0.79
COPS3Q9UNS2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.01■□□□□ 0.79
COPS3Q9UNS2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COPS3Q9UNS2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COPS3Q9UNS2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.01■□□□□ 0.79
COPS3Q9UNS2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20■□□□□ 0.79
COPS3Q9UNS2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COPS3Q9UNS2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
COPS3Q9UNS2 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COPS3Q9UNS2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
COPS3Q9UNS2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
COPS3Q9UNS2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20■□□□□ 0.79
COPS3Q9UNS2 AC139795.1-202ENST00000500444 432 ntBASIC20■□□□□ 0.79
COPS3Q9UNS2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20■□□□□ 0.79
COPS3Q9UNS2 GUSBP5-202ENST00000510805 1989 ntBASIC20■□□□□ 0.79
COPS3Q9UNS2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20■□□□□ 0.79
COPS3Q9UNS2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COPS3Q9UNS2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms