Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
DDX41Q9UJV9 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
DDX41Q9UJV9 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
DDX41Q9UJV9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
DDX41Q9UJV9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
DDX41Q9UJV9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
DDX41Q9UJV9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
DDX41Q9UJV9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
DDX41Q9UJV9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
DDX41Q9UJV9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.88■■□□□ 1.73
DDX41Q9UJV9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.88■■□□□ 1.73
DDX41Q9UJV9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
DDX41Q9UJV9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
DDX41Q9UJV9 AL136162.1-201ENST00000607711 1078 ntBASIC25.88■■□□□ 1.73
DDX41Q9UJV9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.88■■□□□ 1.73
DDX41Q9UJV9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
DDX41Q9UJV9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
DDX41Q9UJV9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.87■■□□□ 1.73
DDX41Q9UJV9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.87■■□□□ 1.73
DDX41Q9UJV9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
DDX41Q9UJV9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
DDX41Q9UJV9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
DDX41Q9UJV9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
DDX41Q9UJV9 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.87■■□□□ 1.73
DDX41Q9UJV9 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
DDX41Q9UJV9 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
DDX41Q9UJV9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.86■■□□□ 1.73
DDX41Q9UJV9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
DDX41Q9UJV9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.86■■□□□ 1.73
DDX41Q9UJV9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.86■■□□□ 1.73
DDX41Q9UJV9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
DDX41Q9UJV9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.86■■□□□ 1.73
DDX41Q9UJV9 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.85■■□□□ 1.73
DDX41Q9UJV9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
DDX41Q9UJV9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
DDX41Q9UJV9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.85■■□□□ 1.73
DDX41Q9UJV9 AL031432.3-201ENST00000607698 485 ntBASIC25.85■■□□□ 1.73
DDX41Q9UJV9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
DDX41Q9UJV9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
DDX41Q9UJV9 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.84■■□□□ 1.73
DDX41Q9UJV9 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
DDX41Q9UJV9 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
DDX41Q9UJV9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
DDX41Q9UJV9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.84■■□□□ 1.73
DDX41Q9UJV9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.84■■□□□ 1.73
DDX41Q9UJV9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.84■■□□□ 1.73
DDX41Q9UJV9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.84■■□□□ 1.73
DDX41Q9UJV9 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.84■■□□□ 1.73
DDX41Q9UJV9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
DDX41Q9UJV9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.84■■□□□ 1.73
DDX41Q9UJV9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
DDX41Q9UJV9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
DDX41Q9UJV9 AC135279.3-201ENST00000610945 1311 ntBASIC25.84■■□□□ 1.73
DDX41Q9UJV9 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
DDX41Q9UJV9 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC25.83■■□□□ 1.73
DDX41Q9UJV9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
DDX41Q9UJV9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
DDX41Q9UJV9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
DDX41Q9UJV9 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC25.83■■□□□ 1.73
DDX41Q9UJV9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
DDX41Q9UJV9 AC024257.2-201ENST00000549699 147 ntBASIC25.83■■□□□ 1.73
DDX41Q9UJV9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.83■■□□□ 1.73
DDX41Q9UJV9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.73
DDX41Q9UJV9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
DDX41Q9UJV9 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
DDX41Q9UJV9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
DDX41Q9UJV9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
DDX41Q9UJV9 HLA-L-211ENST00000482052 1765 ntBASIC25.82■■□□□ 1.72
DDX41Q9UJV9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
DDX41Q9UJV9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
DDX41Q9UJV9 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
DDX41Q9UJV9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.81■■□□□ 1.72
DDX41Q9UJV9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
DDX41Q9UJV9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.81■■□□□ 1.72
DDX41Q9UJV9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.81■■□□□ 1.72
DDX41Q9UJV9 SUDS3P1-201ENST00000505831 966 ntBASIC25.81■■□□□ 1.72
DDX41Q9UJV9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.81■■□□□ 1.72
DDX41Q9UJV9 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
DDX41Q9UJV9 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.8■■□□□ 1.72
DDX41Q9UJV9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
DDX41Q9UJV9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
DDX41Q9UJV9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.8■■□□□ 1.72
DDX41Q9UJV9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.8■■□□□ 1.72
DDX41Q9UJV9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
DDX41Q9UJV9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
DDX41Q9UJV9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
DDX41Q9UJV9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
DDX41Q9UJV9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
DDX41Q9UJV9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.79■■□□□ 1.72
DDX41Q9UJV9 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
DDX41Q9UJV9 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
DDX41Q9UJV9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC25.79■■□□□ 1.72
DDX41Q9UJV9 AC009102.2-201ENST00000606772 1639 ntBASIC25.79■■□□□ 1.72
DDX41Q9UJV9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
DDX41Q9UJV9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.79■■□□□ 1.72
DDX41Q9UJV9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
DDX41Q9UJV9 AC142381.2-201ENST00000566120 298 ntBASIC25.79■■□□□ 1.72
DDX41Q9UJV9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.79■■□□□ 1.72
DDX41Q9UJV9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
DDX41Q9UJV9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms