Protein–RNA interactions for Protein: Q9NRW3

APOBEC3C, DNA dC->dU-editing enzyme APOBEC-3C, humanhuman

Known RBP eCLIP

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3CQ9NRW3 SLC37A3-208ENST00000464865 1228 ntTSL 218.57■□□□□ 0.561e-323■□□□□ 11
APOBEC3CQ9NRW3 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.041e-323■□□□□ 11
APOBEC3CQ9NRW3 RNA5SP248-201ENST00000365602 127 ntBASIC13.96□□□□□ -0.171e-323■□□□□ 11
APOBEC3CQ9NRW3 SLC37A3-203ENST00000447932 3254 ntTSL 1 (best) BASIC13.67□□□□□ -0.221e-323■□□□□ 11
APOBEC3CQ9NRW3 SLC37A3-222ENST00000490760 574 ntTSL 512.71□□□□□ -0.371e-323■□□□□ 11
APOBEC3CQ9NRW3 SLC37A3-227ENST00000495257 573 ntTSL 411.64□□□□□ -0.551e-323■□□□□ 11
APOBEC3CQ9NRW3 SLC37A3-215ENST00000477571 3488 ntTSL 511.18□□□□□ -0.621e-323■□□□□ 11
APOBEC3CQ9NRW3 SLC37A3-205ENST00000461089 617 ntTSL 410.35□□□□□ -0.751e-323■□□□□ 11
APOBEC3CQ9NRW3 SLC37A3-224ENST00000491505 544 ntTSL 28.63□□□□□ -1.031e-323■□□□□ 11
APOBEC3CQ9NRW3 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC7.59□□□□□ -1.191e-323■□□□□ 11
APOBEC3CQ9NRW3 SLC37A3-206ENST00000462881 551 ntTSL 45.19□□□□□ -1.581e-323■□□□□ 11
APOBEC3CQ9NRW3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.171e-16■□□□□ 11
APOBEC3CQ9NRW3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.081e-16■□□□□ 11
APOBEC3CQ9NRW3 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.351e-16■□□□□ 11
APOBEC3CQ9NRW3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.44■□□□□ 0.381e-13■□□□□ 10.9
APOBEC3CQ9NRW3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.071e-13■□□□□ 10.9
APOBEC3CQ9NRW3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.311e-7■□□□□ 10.9
APOBEC3CQ9NRW3 AHSA1-213ENST00000557476 584 ntTSL 316.91■□□□□ 0.31e-7■□□□□ 10.9
APOBEC3CQ9NRW3 AHSA1-209ENST00000555729 621 ntTSL 316.91■□□□□ 0.31e-7■□□□□ 10.9
APOBEC3CQ9NRW3 AHSA1-206ENST00000555457 641 ntTSL 316.91■□□□□ 0.31e-7■□□□□ 10.9
APOBEC3CQ9NRW3 AHSA1-207ENST00000555473 561 ntTSL 213.37□□□□□ -0.271e-7■□□□□ 10.9
APOBEC3CQ9NRW3 AHSA1-210ENST00000556369 849 ntTSL 512.92□□□□□ -0.341e-7■□□□□ 10.9
APOBEC3CQ9NRW3 AHSA1-205ENST00000555133 1048 ntTSL 312.44□□□□□ -0.421e-7■□□□□ 10.9
APOBEC3CQ9NRW3 PTPN12-216ENST00000523952 500 ntTSL 410.45□□□□□ -0.741e-7■□□□□ 10.9
APOBEC3CQ9NRW3 PTPN12-209ENST00000460731 582 ntTSL 26□□□□□ -1.451e-7■□□□□ 10.9
APOBEC3CQ9NRW3 SNRPG-208ENST00000482975 1093 ntTSL 1 (best) BASIC11.51□□□□□ -0.572e-6■□□□□ 10.9
APOBEC3CQ9NRW3 SNRPG-204ENST00000438261 515 ntTSL 2 BASIC11.07□□□□□ -0.642e-6■□□□□ 10.9
APOBEC3CQ9NRW3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.75□□□□□ -2.132e-6■□□□□ 10.9
APOBEC3CQ9NRW3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.75□□□□□ -2.132e-6■□□□□ 10.9
APOBEC3CQ9NRW3 RPS24-211ENST00000480662 711 ntTSL 29.51□□□□□ -0.898e-20■□□□□ 10.9
APOBEC3CQ9NRW3 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.073e-17■□□□□ 10.9
APOBEC3CQ9NRW3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.05■□□□□ 0.967e-15■□□□□ 10.9
APOBEC3CQ9NRW3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.887e-15■□□□□ 10.9
APOBEC3CQ9NRW3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.813e-8■□□□□ 10.9
APOBEC3CQ9NRW3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.687e-15■□□□□ 10.9
APOBEC3CQ9NRW3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.687e-15■□□□□ 10.9
APOBEC3CQ9NRW3 GAS2-205ENST00000528582 736 ntTSL 319.14■□□□□ 0.653e-8■□□□□ 10.9
APOBEC3CQ9NRW3 CTSD-214ENST00000637937 1262 ntTSL 518.59■□□□□ 0.573e-8■□□□□ 10.9
APOBEC3CQ9NRW3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.523e-8■□□□□ 10.9
APOBEC3CQ9NRW3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.73■□□□□ 0.433e-8■□□□□ 10.9
APOBEC3CQ9NRW3 AC068580.4-204ENST00000427721 1007 ntTSL 217.53■□□□□ 0.43e-8■□□□□ 10.9
APOBEC3CQ9NRW3 AC068580.4-202ENST00000636579 350 ntTSL 316.75■□□□□ 0.273e-8■□□□□ 10.9
APOBEC3CQ9NRW3 CTSD-204ENST00000433655 2006 ntTSL 516.74■□□□□ 0.273e-8■□□□□ 10.9
APOBEC3CQ9NRW3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.243e-8■□□□□ 10.9
APOBEC3CQ9NRW3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.133e-8■□□□□ 10.9
APOBEC3CQ9NRW3 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.62■□□□□ 0.093e-8■□□□□ 10.9
APOBEC3CQ9NRW3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 03e-8■□□□□ 10.9
APOBEC3CQ9NRW3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.043e-8■□□□□ 10.9
APOBEC3CQ9NRW3 ATP1B3-204ENST00000466678 1708 ntTSL 314.56□□□□□ -0.083e-8■□□□□ 10.9
APOBEC3CQ9NRW3 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.123e-8■□□□□ 10.9
APOBEC3CQ9NRW3 ALAS2-208ENST00000498636 959 ntTSL 313.8□□□□□ -0.23e-8■□□□□ 10.9
APOBEC3CQ9NRW3 ATP5G2-203ENST00000495596 1976 ntTSL 1 (best)13.8□□□□□ -0.27e-15■□□□□ 10.9
APOBEC3CQ9NRW3 ATP5G2-202ENST00000394349 878 ntTSL 2 BASIC13.01□□□□□ -0.337e-15■□□□□ 10.9
APOBEC3CQ9NRW3 GPI-213ENST00000590362 378 ntTSL 512.01□□□□□ -0.493e-8■□□□□ 10.9
APOBEC3CQ9NRW3 AC068580.4-203ENST00000636397 4038 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.543e-8■□□□□ 10.9
APOBEC3CQ9NRW3 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC8.55□□□□□ -1.047e-15■□□□□ 10.9
APOBEC3CQ9NRW3 GAS2-210ENST00000630668 674 ntTSL 5 BASIC8.28□□□□□ -1.083e-8■□□□□ 10.9
APOBEC3CQ9NRW3 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC8.17□□□□□ -1.13e-8■□□□□ 10.9
APOBEC3CQ9NRW3 ATP1B3-203ENST00000465172 1951 ntTSL 27.13□□□□□ -1.273e-8■□□□□ 10.9
APOBEC3CQ9NRW3 GAS2-203ENST00000524701 2241 ntTSL 26.92□□□□□ -1.33e-8■□□□□ 10.9
APOBEC3CQ9NRW3 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.363e-8■□□□□ 10.9
APOBEC3CQ9NRW3 GAS2-208ENST00000533363 547 ntTSL 36.15□□□□□ -1.423e-8■□□□□ 10.9
APOBEC3CQ9NRW3 ATP1B3-207ENST00000484727 657 ntTSL 26.03□□□□□ -1.443e-8■□□□□ 10.9
APOBEC3CQ9NRW3 GAS2-206ENST00000532398 712 ntTSL 35□□□□□ -1.613e-8■□□□□ 10.9
APOBEC3CQ9NRW3 GAS2-209ENST00000534801 579 ntTSL 34.56□□□□□ -1.683e-8■□□□□ 10.9
APOBEC3CQ9NRW3 GAS2-207ENST00000533092 735 ntTSL 54.56□□□□□ -1.683e-8■□□□□ 10.9
APOBEC3CQ9NRW3 ATP1B3-209ENST00000487199 421 ntTSL 32.28□□□□□ -2.043e-8■□□□□ 10.9
APOBEC3CQ9NRW3 RNA5SP338-201ENST00000410495 85 ntBASIC1.76□□□□□ -2.133e-8■□□□□ 10.9
APOBEC3CQ9NRW3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.05■■□□□ 1.284e-8■□□□□ 10.9
APOBEC3CQ9NRW3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.5■■□□□ 1.194e-8■□□□□ 10.9
APOBEC3CQ9NRW3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.11■□□□□ 0.654e-8■□□□□ 10.9
APOBEC3CQ9NRW3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.634e-8■□□□□ 10.9
APOBEC3CQ9NRW3 RPL39-202ENST00000468844 1915 ntTSL 1 (best)18.45■□□□□ 0.542e-19■□□□□ 10.9
APOBEC3CQ9NRW3 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.822e-19■□□□□ 10.9
APOBEC3CQ9NRW3 HNRNPH1-231ENST00000519033 832 ntTSL 318.47■□□□□ 0.554e-14■□□□□ 10.9
APOBEC3CQ9NRW3 HNRNPH1-248ENST00000524179 598 ntTSL 216.11■□□□□ 0.174e-14■□□□□ 10.9
APOBEC3CQ9NRW3 HNRNPH1-218ENST00000510678 1996 ntTSL 514.75□□□□□ -0.054e-14■□□□□ 10.9
APOBEC3CQ9NRW3 HNRNPH1-246ENST00000523449 793 ntTSL 314.47□□□□□ -0.094e-14■□□□□ 10.9
APOBEC3CQ9NRW3 HNRNPH1-223ENST00000514332 2444 ntTSL 214.09□□□□□ -0.154e-14■□□□□ 10.9
APOBEC3CQ9NRW3 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.02□□□□□ -0.334e-14■□□□□ 10.9
APOBEC3CQ9NRW3 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.364e-14■□□□□ 10.9
APOBEC3CQ9NRW3 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.384e-14■□□□□ 10.9
APOBEC3CQ9NRW3 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.55□□□□□ -0.44e-14■□□□□ 10.9
APOBEC3CQ9NRW3 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.574e-14■□□□□ 10.9
APOBEC3CQ9NRW3 HNRNPH1-206ENST00000502904 2913 ntTSL 210.06□□□□□ -0.84e-14■□□□□ 10.9
APOBEC3CQ9NRW3 HNRNPH1-227ENST00000515481 5564 ntTSL 26.46□□□□□ -1.384e-14■□□□□ 10.9
APOBEC3CQ9NRW3 SETD5-203ENST00000402198 6827 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.773e-6■□□□□ 10.9
APOBEC3CQ9NRW3 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.073e-6■□□□□ 10.9
APOBEC3CQ9NRW3 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8□□□□□ -1.133e-6■□□□□ 10.9
APOBEC3CQ9NRW3 SETD5-202ENST00000399686 3362 ntTSL 56.84□□□□□ -1.313e-6■□□□□ 10.9
APOBEC3CQ9NRW3 NORAD-201ENST00000565493 5339 ntBASIC15.26■□□□□ 0.033e-6■□□□□ 10.8
APOBEC3CQ9NRW3 RNA5SP481-201ENST00000516814 122 ntBASIC1.24□□□□□ -2.216e-9■□□□□ 10.8
APOBEC3CQ9NRW3 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC15.03■□□□□ -09e-7■□□□□ 10.8
APOBEC3CQ9NRW3 TIMP1-203ENST00000441738 341 ntTSL 58.88□□□□□ -0.999e-7■□□□□ 10.8
APOBEC3CQ9NRW3 CAPZA1-201ENST00000263168 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.861e-6■□□□□ 10.8
APOBEC3CQ9NRW3 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.657e-8■□□□□ 10.8
APOBEC3CQ9NRW3 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.097e-8■□□□□ 10.8
APOBEC3CQ9NRW3 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.17e-8■□□□□ 10.8
APOBEC3CQ9NRW3 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC8.1□□□□□ -1.117e-8■□□□□ 10.8
APOBEC3CQ9NRW3 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.77□□□□□ -1.177e-8■□□□□ 10.8
Retrieved 100 of 4,302 protein–RNA pairs in 105.8 ms