Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CTPS2Q9NRF8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTPS2Q9NRF8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTPS2Q9NRF8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTPS2Q9NRF8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.92■□□□□ 0.94
CTPS2Q9NRF8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTPS2Q9NRF8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.92■□□□□ 0.94
CTPS2Q9NRF8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTPS2Q9NRF8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTPS2Q9NRF8 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.92■□□□□ 0.94
CTPS2Q9NRF8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTPS2Q9NRF8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTPS2Q9NRF8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTPS2Q9NRF8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTPS2Q9NRF8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.91■□□□□ 0.94
CTPS2Q9NRF8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.91■□□□□ 0.94
CTPS2Q9NRF8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.91■□□□□ 0.94
CTPS2Q9NRF8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTPS2Q9NRF8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
CTPS2Q9NRF8 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.9■□□□□ 0.94
CTPS2Q9NRF8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTPS2Q9NRF8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTPS2Q9NRF8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTPS2Q9NRF8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTPS2Q9NRF8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.9■□□□□ 0.94
CTPS2Q9NRF8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTPS2Q9NRF8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.9■□□□□ 0.94
CTPS2Q9NRF8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.9■□□□□ 0.94
CTPS2Q9NRF8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTPS2Q9NRF8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.89■□□□□ 0.94
CTPS2Q9NRF8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.89■□□□□ 0.94
CTPS2Q9NRF8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CTPS2Q9NRF8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTPS2Q9NRF8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.89■□□□□ 0.93
CTPS2Q9NRF8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.93
CTPS2Q9NRF8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTPS2Q9NRF8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTPS2Q9NRF8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.89■□□□□ 0.93
CTPS2Q9NRF8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTPS2Q9NRF8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTPS2Q9NRF8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTPS2Q9NRF8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTPS2Q9NRF8 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.88■□□□□ 0.93
CTPS2Q9NRF8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CTPS2Q9NRF8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.88■□□□□ 0.93
CTPS2Q9NRF8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.88■□□□□ 0.93
CTPS2Q9NRF8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CTPS2Q9NRF8 ALDH1A3-203ENST00000557963 1670 ntBASIC20.88■□□□□ 0.93
CTPS2Q9NRF8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTPS2Q9NRF8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTPS2Q9NRF8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.88■□□□□ 0.93
CTPS2Q9NRF8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.88■□□□□ 0.93
CTPS2Q9NRF8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTPS2Q9NRF8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CTPS2Q9NRF8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CTPS2Q9NRF8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CTPS2Q9NRF8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CTPS2Q9NRF8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CTPS2Q9NRF8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTPS2Q9NRF8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTPS2Q9NRF8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.87■□□□□ 0.93
CTPS2Q9NRF8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTPS2Q9NRF8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTPS2Q9NRF8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.87■□□□□ 0.93
CTPS2Q9NRF8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.87■□□□□ 0.93
CTPS2Q9NRF8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTPS2Q9NRF8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTPS2Q9NRF8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CTPS2Q9NRF8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CTPS2Q9NRF8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CTPS2Q9NRF8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTPS2Q9NRF8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTPS2Q9NRF8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CTPS2Q9NRF8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTPS2Q9NRF8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTPS2Q9NRF8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.86■□□□□ 0.93
CTPS2Q9NRF8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTPS2Q9NRF8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CTPS2Q9NRF8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTPS2Q9NRF8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CTPS2Q9NRF8 AC137630.3-201ENST00000607245 391 ntBASIC20.85■□□□□ 0.93
CTPS2Q9NRF8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CTPS2Q9NRF8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTPS2Q9NRF8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTPS2Q9NRF8 AC092068.2-201ENST00000590491 1708 ntBASIC20.84■□□□□ 0.93
CTPS2Q9NRF8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.84■□□□□ 0.93
CTPS2Q9NRF8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.84■□□□□ 0.93
CTPS2Q9NRF8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTPS2Q9NRF8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CTPS2Q9NRF8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CTPS2Q9NRF8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTPS2Q9NRF8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CTPS2Q9NRF8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTPS2Q9NRF8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTPS2Q9NRF8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTPS2Q9NRF8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CTPS2Q9NRF8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
CTPS2Q9NRF8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.83■□□□□ 0.93
CTPS2Q9NRF8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CTPS2Q9NRF8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms