Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PDLIM7Q9NR12 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
PDLIM7Q9NR12 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.51■■□□□ 1.67
PDLIM7Q9NR12 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PDLIM7Q9NR12 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
PDLIM7Q9NR12 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
PDLIM7Q9NR12 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PDLIM7Q9NR12 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.5■■□□□ 1.67
PDLIM7Q9NR12 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
PDLIM7Q9NR12 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PDLIM7Q9NR12 AC135731.1-201ENST00000569415 2548 ntBASIC25.5■■□□□ 1.67
PDLIM7Q9NR12 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.5■■□□□ 1.67
PDLIM7Q9NR12 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.5■■□□□ 1.67
PDLIM7Q9NR12 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PDLIM7Q9NR12 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PDLIM7Q9NR12 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC25.49■■□□□ 1.67
PDLIM7Q9NR12 AL137784.2-201ENST00000607332 1000 ntBASIC25.49■■□□□ 1.67
PDLIM7Q9NR12 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.49■■□□□ 1.67
PDLIM7Q9NR12 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PDLIM7Q9NR12 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.48■■□□□ 1.67
PDLIM7Q9NR12 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PDLIM7Q9NR12 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
PDLIM7Q9NR12 HACD1-201ENST00000326961 773 ntTSL 2 BASIC25.48■■□□□ 1.67
PDLIM7Q9NR12 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PDLIM7Q9NR12 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC25.48■■□□□ 1.67
PDLIM7Q9NR12 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC25.48■■□□□ 1.67
PDLIM7Q9NR12 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PDLIM7Q9NR12 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PDLIM7Q9NR12 AL161729.1-201ENST00000604104 1402 ntBASIC25.47■■□□□ 1.67
PDLIM7Q9NR12 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.47■■□□□ 1.67
PDLIM7Q9NR12 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.47■■□□□ 1.67
PDLIM7Q9NR12 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.47■■□□□ 1.67
PDLIM7Q9NR12 AK1-201ENST00000223836 736 ntTSL 3 BASIC25.47■■□□□ 1.67
PDLIM7Q9NR12 KRT18P5-201ENST00000436075 1291 ntBASIC25.47■■□□□ 1.67
PDLIM7Q9NR12 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.47■■□□□ 1.67
PDLIM7Q9NR12 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
PDLIM7Q9NR12 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.47■■□□□ 1.67
PDLIM7Q9NR12 AC092437.1-201ENST00000624794 1048 ntBASIC25.47■■□□□ 1.67
PDLIM7Q9NR12 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
PDLIM7Q9NR12 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
PDLIM7Q9NR12 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
PDLIM7Q9NR12 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
PDLIM7Q9NR12 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PDLIM7Q9NR12 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
PDLIM7Q9NR12 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC25.46■■□□□ 1.67
PDLIM7Q9NR12 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.46■■□□□ 1.67
PDLIM7Q9NR12 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC25.46■■□□□ 1.67
PDLIM7Q9NR12 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PDLIM7Q9NR12 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.46■■□□□ 1.67
PDLIM7Q9NR12 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PDLIM7Q9NR12 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.46■■□□□ 1.67
PDLIM7Q9NR12 AC136469.2-201ENST00000623944 1028 ntBASIC25.46■■□□□ 1.67
PDLIM7Q9NR12 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC25.45■■□□□ 1.67
PDLIM7Q9NR12 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
PDLIM7Q9NR12 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PDLIM7Q9NR12 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PDLIM7Q9NR12 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PDLIM7Q9NR12 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.45■■□□□ 1.66
PDLIM7Q9NR12 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PDLIM7Q9NR12 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PDLIM7Q9NR12 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PDLIM7Q9NR12 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.44■■□□□ 1.66
PDLIM7Q9NR12 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PDLIM7Q9NR12 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PDLIM7Q9NR12 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PDLIM7Q9NR12 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.44■■□□□ 1.66
PDLIM7Q9NR12 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PDLIM7Q9NR12 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PDLIM7Q9NR12 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.44■■□□□ 1.66
PDLIM7Q9NR12 MPST-208ENST00000628507 698 ntTSL 5 BASIC25.44■■□□□ 1.66
PDLIM7Q9NR12 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.44■■□□□ 1.66
PDLIM7Q9NR12 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.44■■□□□ 1.66
PDLIM7Q9NR12 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PDLIM7Q9NR12 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PDLIM7Q9NR12 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
PDLIM7Q9NR12 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
PDLIM7Q9NR12 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.43■■□□□ 1.66
PDLIM7Q9NR12 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC25.43■■□□□ 1.66
PDLIM7Q9NR12 AC233992.3-201ENST00000607491 485 ntBASIC25.43■■□□□ 1.66
PDLIM7Q9NR12 AL031602.1-201ENST00000633169 911 ntBASIC25.43■■□□□ 1.66
PDLIM7Q9NR12 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.43■■□□□ 1.66
PDLIM7Q9NR12 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.43■■□□□ 1.66
PDLIM7Q9NR12 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
PDLIM7Q9NR12 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
PDLIM7Q9NR12 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PDLIM7Q9NR12 AC009102.2-201ENST00000606772 1639 ntBASIC25.42■■□□□ 1.66
PDLIM7Q9NR12 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC25.42■■□□□ 1.66
PDLIM7Q9NR12 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PDLIM7Q9NR12 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.42■■□□□ 1.66
PDLIM7Q9NR12 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC25.42■■□□□ 1.66
PDLIM7Q9NR12 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.42■■□□□ 1.66
PDLIM7Q9NR12 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PDLIM7Q9NR12 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PDLIM7Q9NR12 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
PDLIM7Q9NR12 AL139125.2-201ENST00000623134 1869 ntBASIC25.41■■□□□ 1.66
PDLIM7Q9NR12 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
PDLIM7Q9NR12 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.41■■□□□ 1.66
PDLIM7Q9NR12 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PDLIM7Q9NR12 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PDLIM7Q9NR12 SLC47A1P1-202ENST00000449666 945 ntBASIC25.41■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms