Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.71■■□□□ 1.07
LRTM1Q9HBL6 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LRTM1Q9HBL6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRTM1Q9HBL6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRTM1Q9HBL6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LRTM1Q9HBL6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
LRTM1Q9HBL6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.7■■□□□ 1.06
LRTM1Q9HBL6 AC004448.1-201ENST00000458332 883 ntBASIC21.7■■□□□ 1.06
LRTM1Q9HBL6 MIR4508-201ENST00000584178 70 ntBASIC21.7■■□□□ 1.06
LRTM1Q9HBL6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRTM1Q9HBL6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRTM1Q9HBL6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.7■■□□□ 1.06
LRTM1Q9HBL6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
LRTM1Q9HBL6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.7■■□□□ 1.06
LRTM1Q9HBL6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LRTM1Q9HBL6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.69■■□□□ 1.06
LRTM1Q9HBL6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LRTM1Q9HBL6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
LRTM1Q9HBL6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LRTM1Q9HBL6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRTM1Q9HBL6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRTM1Q9HBL6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRTM1Q9HBL6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.69■■□□□ 1.06
LRTM1Q9HBL6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRTM1Q9HBL6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRTM1Q9HBL6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRTM1Q9HBL6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.68■■□□□ 1.06
LRTM1Q9HBL6 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.68■■□□□ 1.06
LRTM1Q9HBL6 AL033527.3-201ENST00000566366 1196 ntBASIC21.68■■□□□ 1.06
LRTM1Q9HBL6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.68■■□□□ 1.06
LRTM1Q9HBL6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LRTM1Q9HBL6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LRTM1Q9HBL6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.68■■□□□ 1.06
LRTM1Q9HBL6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LRTM1Q9HBL6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.68■■□□□ 1.06
LRTM1Q9HBL6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRTM1Q9HBL6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
LRTM1Q9HBL6 AC079834.2-201ENST00000609776 1949 ntBASIC21.67■■□□□ 1.06
LRTM1Q9HBL6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRTM1Q9HBL6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRTM1Q9HBL6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.67■■□□□ 1.06
LRTM1Q9HBL6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRTM1Q9HBL6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRTM1Q9HBL6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRTM1Q9HBL6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
LRTM1Q9HBL6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.66■■□□□ 1.06
LRTM1Q9HBL6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
LRTM1Q9HBL6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRTM1Q9HBL6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRTM1Q9HBL6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.66■■□□□ 1.06
LRTM1Q9HBL6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
LRTM1Q9HBL6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRTM1Q9HBL6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
LRTM1Q9HBL6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRTM1Q9HBL6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRTM1Q9HBL6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LRTM1Q9HBL6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRTM1Q9HBL6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.65■■□□□ 1.06
LRTM1Q9HBL6 C1orf229-201ENST00000623686 2258 ntBASIC21.65■■□□□ 1.06
LRTM1Q9HBL6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.65■■□□□ 1.06
LRTM1Q9HBL6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
LRTM1Q9HBL6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRTM1Q9HBL6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRTM1Q9HBL6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.65■■□□□ 1.06
LRTM1Q9HBL6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.64■■□□□ 1.06
LRTM1Q9HBL6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
LRTM1Q9HBL6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
LRTM1Q9HBL6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LRTM1Q9HBL6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
LRTM1Q9HBL6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LRTM1Q9HBL6 AC103834.1-201ENST00000520383 144 ntBASIC21.64■■□□□ 1.05
LRTM1Q9HBL6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.64■■□□□ 1.05
LRTM1Q9HBL6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LRTM1Q9HBL6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.64■■□□□ 1.05
LRTM1Q9HBL6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LRTM1Q9HBL6 AC233723.2-201ENST00000623798 2106 ntBASIC21.64■■□□□ 1.05
LRTM1Q9HBL6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LRTM1Q9HBL6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
LRTM1Q9HBL6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRTM1Q9HBL6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
LRTM1Q9HBL6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRTM1Q9HBL6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LRTM1Q9HBL6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.63■■□□□ 1.05
LRTM1Q9HBL6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.63■■□□□ 1.05
LRTM1Q9HBL6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.63■■□□□ 1.05
LRTM1Q9HBL6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.63■■□□□ 1.05
LRTM1Q9HBL6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRTM1Q9HBL6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
LRTM1Q9HBL6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
LRTM1Q9HBL6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
LRTM1Q9HBL6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.62■■□□□ 1.05
LRTM1Q9HBL6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.62■■□□□ 1.05
LRTM1Q9HBL6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRTM1Q9HBL6 AC079630.1-202ENST00000618127 1840 ntBASIC21.62■■□□□ 1.05
LRTM1Q9HBL6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.62■■□□□ 1.05
LRTM1Q9HBL6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRTM1Q9HBL6 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LRTM1Q9HBL6 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRTM1Q9HBL6 AL117328.2-201ENST00000624617 1940 ntBASIC21.62■■□□□ 1.05
LRTM1Q9HBL6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms