Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NICN1Q9BSH3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
NICN1Q9BSH3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NICN1Q9BSH3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NICN1Q9BSH3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NICN1Q9BSH3 LINC00565-201ENST00000562710 2331 ntBASIC19.33■□□□□ 0.68
NICN1Q9BSH3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NICN1Q9BSH3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NICN1Q9BSH3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NICN1Q9BSH3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NICN1Q9BSH3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NICN1Q9BSH3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NICN1Q9BSH3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NICN1Q9BSH3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NICN1Q9BSH3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NICN1Q9BSH3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.32■□□□□ 0.68
NICN1Q9BSH3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.32■□□□□ 0.68
NICN1Q9BSH3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NICN1Q9BSH3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.31■□□□□ 0.68
NICN1Q9BSH3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
NICN1Q9BSH3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NICN1Q9BSH3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NICN1Q9BSH3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NICN1Q9BSH3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NICN1Q9BSH3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.31■□□□□ 0.68
NICN1Q9BSH3 AC131274.2-201ENST00000580697 1507 ntBASIC19.3■□□□□ 0.68
NICN1Q9BSH3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NICN1Q9BSH3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
NICN1Q9BSH3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NICN1Q9BSH3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NICN1Q9BSH3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NICN1Q9BSH3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NICN1Q9BSH3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NICN1Q9BSH3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.3■□□□□ 0.68
NICN1Q9BSH3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NICN1Q9BSH3 LONRF2P2-201ENST00000439212 571 ntBASIC19.3■□□□□ 0.68
NICN1Q9BSH3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.3■□□□□ 0.68
NICN1Q9BSH3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NICN1Q9BSH3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NICN1Q9BSH3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NICN1Q9BSH3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.3■□□□□ 0.68
NICN1Q9BSH3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NICN1Q9BSH3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
NICN1Q9BSH3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.29■□□□□ 0.68
NICN1Q9BSH3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NICN1Q9BSH3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NICN1Q9BSH3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NICN1Q9BSH3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NICN1Q9BSH3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.29■□□□□ 0.68
NICN1Q9BSH3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NICN1Q9BSH3 GUSBP5-202ENST00000510805 1989 ntBASIC19.29■□□□□ 0.68
NICN1Q9BSH3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.29■□□□□ 0.68
NICN1Q9BSH3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
NICN1Q9BSH3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NICN1Q9BSH3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NICN1Q9BSH3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NICN1Q9BSH3 ALDH1A3-203ENST00000557963 1670 ntBASIC19.28■□□□□ 0.68
NICN1Q9BSH3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
NICN1Q9BSH3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NICN1Q9BSH3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.28■□□□□ 0.68
NICN1Q9BSH3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.28■□□□□ 0.68
NICN1Q9BSH3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NICN1Q9BSH3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NICN1Q9BSH3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NICN1Q9BSH3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NICN1Q9BSH3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NICN1Q9BSH3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NICN1Q9BSH3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NICN1Q9BSH3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NICN1Q9BSH3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.27■□□□□ 0.68
NICN1Q9BSH3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
NICN1Q9BSH3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
NICN1Q9BSH3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NICN1Q9BSH3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NICN1Q9BSH3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
NICN1Q9BSH3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
NICN1Q9BSH3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.26■□□□□ 0.67
NICN1Q9BSH3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NICN1Q9BSH3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NICN1Q9BSH3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NICN1Q9BSH3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NICN1Q9BSH3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NICN1Q9BSH3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NICN1Q9BSH3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.26■□□□□ 0.67
NICN1Q9BSH3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.26■□□□□ 0.67
NICN1Q9BSH3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NICN1Q9BSH3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.26■□□□□ 0.67
NICN1Q9BSH3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NICN1Q9BSH3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NICN1Q9BSH3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NICN1Q9BSH3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NICN1Q9BSH3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NICN1Q9BSH3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NICN1Q9BSH3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NICN1Q9BSH3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NICN1Q9BSH3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NICN1Q9BSH3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NICN1Q9BSH3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NICN1Q9BSH3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NICN1Q9BSH3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms