Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXC2Q99958 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXC2Q99958 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.1■□□□□ 0.65
FOXC2Q99958 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXC2Q99958 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
FOXC2Q99958 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.1■□□□□ 0.65
FOXC2Q99958 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.1■□□□□ 0.65
FOXC2Q99958 RAP2CP1-201ENST00000605103 478 ntBASIC19.1■□□□□ 0.65
FOXC2Q99958 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXC2Q99958 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.1■□□□□ 0.65
FOXC2Q99958 AC142086.6-201ENST00000621154 1765 ntBASIC19.1■□□□□ 0.65
FOXC2Q99958 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.1■□□□□ 0.65
FOXC2Q99958 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.1■□□□□ 0.65
FOXC2Q99958 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
FOXC2Q99958 AL022069.1-201ENST00000568025 1636 ntBASIC19.1■□□□□ 0.65
FOXC2Q99958 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXC2Q99958 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXC2Q99958 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXC2Q99958 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
FOXC2Q99958 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.09■□□□□ 0.65
FOXC2Q99958 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXC2Q99958 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXC2Q99958 AC006015.1-201ENST00000429970 570 ntBASIC19.09■□□□□ 0.65
FOXC2Q99958 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
FOXC2Q99958 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXC2Q99958 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXC2Q99958 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.09■□□□□ 0.65
FOXC2Q99958 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.08■□□□□ 0.65
FOXC2Q99958 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXC2Q99958 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
FOXC2Q99958 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
FOXC2Q99958 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
FOXC2Q99958 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
FOXC2Q99958 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
FOXC2Q99958 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
FOXC2Q99958 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.08■□□□□ 0.64
FOXC2Q99958 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.08■□□□□ 0.64
FOXC2Q99958 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
FOXC2Q99958 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.07■□□□□ 0.64
FOXC2Q99958 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXC2Q99958 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.07■□□□□ 0.64
FOXC2Q99958 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXC2Q99958 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXC2Q99958 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.07■□□□□ 0.64
FOXC2Q99958 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXC2Q99958 AC104771.1-201ENST00000603335 964 ntBASIC19.07■□□□□ 0.64
FOXC2Q99958 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.07■□□□□ 0.64
FOXC2Q99958 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXC2Q99958 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXC2Q99958 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.06■□□□□ 0.64
FOXC2Q99958 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FOXC2Q99958 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FOXC2Q99958 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.06■□□□□ 0.64
FOXC2Q99958 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXC2Q99958 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.06■□□□□ 0.64
FOXC2Q99958 AC016769.1-201ENST00000409132 1010 ntBASIC19.06■□□□□ 0.64
FOXC2Q99958 CDCA4P2-201ENST00000441182 718 ntBASIC19.06■□□□□ 0.64
FOXC2Q99958 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXC2Q99958 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.06■□□□□ 0.64
FOXC2Q99958 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.06■□□□□ 0.64
FOXC2Q99958 AC073111.5-205ENST00000641717 521 ntBASIC19.06■□□□□ 0.64
FOXC2Q99958 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXC2Q99958 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.06■□□□□ 0.64
FOXC2Q99958 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXC2Q99958 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXC2Q99958 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXC2Q99958 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXC2Q99958 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXC2Q99958 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FOXC2Q99958 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.05■□□□□ 0.64
FOXC2Q99958 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXC2Q99958 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXC2Q99958 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FOXC2Q99958 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
FOXC2Q99958 AC096887.2-201ENST00000623443 1957 ntBASIC19.04■□□□□ 0.64
FOXC2Q99958 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXC2Q99958 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
FOXC2Q99958 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXC2Q99958 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXC2Q99958 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
FOXC2Q99958 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXC2Q99958 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.04■□□□□ 0.64
FOXC2Q99958 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
FOXC2Q99958 AC026185.1-201ENST00000445748 174 ntBASIC19.04■□□□□ 0.64
FOXC2Q99958 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXC2Q99958 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.04■□□□□ 0.64
FOXC2Q99958 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.04■□□□□ 0.64
FOXC2Q99958 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.04■□□□□ 0.64
FOXC2Q99958 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.04■□□□□ 0.64
FOXC2Q99958 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.04■□□□□ 0.64
FOXC2Q99958 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
FOXC2Q99958 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXC2Q99958 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXC2Q99958 AC135731.1-201ENST00000569415 2548 ntBASIC19.03■□□□□ 0.64
FOXC2Q99958 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXC2Q99958 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXC2Q99958 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.03■□□□□ 0.64
FOXC2Q99958 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.03■□□□□ 0.64
FOXC2Q99958 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXC2Q99958 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms