Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
NEK1Q96PY6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
NEK1Q96PY6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
NEK1Q96PY6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
NEK1Q96PY6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
NEK1Q96PY6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
NEK1Q96PY6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
NEK1Q96PY6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC26.79■■□□□ 1.88
NEK1Q96PY6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
NEK1Q96PY6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC26.79■■□□□ 1.88
NEK1Q96PY6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
NEK1Q96PY6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.78■■□□□ 1.88
NEK1Q96PY6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
NEK1Q96PY6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
NEK1Q96PY6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
NEK1Q96PY6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
NEK1Q96PY6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC26.77■■□□□ 1.88
NEK1Q96PY6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.77■■□□□ 1.88
NEK1Q96PY6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
NEK1Q96PY6 AC005703.6-201ENST00000623265 1329 ntBASIC26.77■■□□□ 1.88
NEK1Q96PY6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.77■■□□□ 1.88
NEK1Q96PY6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.76■■□□□ 1.87
NEK1Q96PY6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
NEK1Q96PY6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
NEK1Q96PY6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
NEK1Q96PY6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.76■■□□□ 1.87
NEK1Q96PY6 TSPY9P-201ENST00000440215 945 ntBASIC26.76■■□□□ 1.87
NEK1Q96PY6 TSPY11P-201ENST00000442607 1045 ntBASIC26.76■■□□□ 1.87
NEK1Q96PY6 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.76■■□□□ 1.87
NEK1Q96PY6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.76■■□□□ 1.87
NEK1Q96PY6 MTDHP2-201ENST00000601468 714 ntBASIC26.76■■□□□ 1.87
NEK1Q96PY6 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.76■■□□□ 1.87
NEK1Q96PY6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
NEK1Q96PY6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
NEK1Q96PY6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
NEK1Q96PY6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
NEK1Q96PY6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
NEK1Q96PY6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.75■■□□□ 1.87
NEK1Q96PY6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
NEK1Q96PY6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.75■■□□□ 1.87
NEK1Q96PY6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.75■■□□□ 1.87
NEK1Q96PY6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
NEK1Q96PY6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
NEK1Q96PY6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.75■■□□□ 1.87
NEK1Q96PY6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
NEK1Q96PY6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
NEK1Q96PY6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
NEK1Q96PY6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
NEK1Q96PY6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
NEK1Q96PY6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC26.74■■□□□ 1.87
NEK1Q96PY6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
NEK1Q96PY6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
NEK1Q96PY6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
NEK1Q96PY6 AC010997.5-201ENST00000609182 354 ntBASIC26.74■■□□□ 1.87
NEK1Q96PY6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
NEK1Q96PY6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
NEK1Q96PY6 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC26.74■■□□□ 1.87
NEK1Q96PY6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
NEK1Q96PY6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC26.73■■□□□ 1.87
NEK1Q96PY6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.73■■□□□ 1.87
NEK1Q96PY6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.73■■□□□ 1.87
NEK1Q96PY6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC26.73■■□□□ 1.87
NEK1Q96PY6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
NEK1Q96PY6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
NEK1Q96PY6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC26.73■■□□□ 1.87
NEK1Q96PY6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.73■■□□□ 1.87
NEK1Q96PY6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.73■■□□□ 1.87
NEK1Q96PY6 AC079630.1-202ENST00000618127 1840 ntBASIC26.72■■□□□ 1.87
NEK1Q96PY6 DUSP8P3-201ENST00000399571 1760 ntBASIC26.72■■□□□ 1.87
NEK1Q96PY6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
NEK1Q96PY6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
NEK1Q96PY6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
NEK1Q96PY6 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.72■■□□□ 1.87
NEK1Q96PY6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
NEK1Q96PY6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC26.72■■□□□ 1.87
NEK1Q96PY6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
NEK1Q96PY6 UNC93B8-201ENST00000511903 705 ntBASIC26.71■■□□□ 1.87
NEK1Q96PY6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
NEK1Q96PY6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.71■■□□□ 1.87
NEK1Q96PY6 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
NEK1Q96PY6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
NEK1Q96PY6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
NEK1Q96PY6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
NEK1Q96PY6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
NEK1Q96PY6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.7■■□□□ 1.87
NEK1Q96PY6 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.7■■□□□ 1.86
NEK1Q96PY6 C9orf163-202ENST00000624034 2573 ntBASIC26.7■■□□□ 1.86
NEK1Q96PY6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
NEK1Q96PY6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
NEK1Q96PY6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
NEK1Q96PY6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC26.69■■□□□ 1.86
NEK1Q96PY6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
NEK1Q96PY6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.69■■□□□ 1.86
NEK1Q96PY6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
NEK1Q96PY6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
NEK1Q96PY6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
NEK1Q96PY6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
NEK1Q96PY6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
NEK1Q96PY6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC26.69■■□□□ 1.86
NEK1Q96PY6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms