Protein–RNA interactions for Protein: Q96K19

RNF170, E3 ubiquitin-protein ligase RNF170, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170Q96K19 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF170Q96K19 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RNF170Q96K19 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF170Q96K19 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RNF170Q96K19 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RNF170Q96K19 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF170Q96K19 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RNF170Q96K19 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF170Q96K19 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF170Q96K19 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RNF170Q96K19 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF170Q96K19 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF170Q96K19 TSPY13P-201ENST00000338964 914 ntBASIC19.91■□□□□ 0.78
RNF170Q96K19 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RNF170Q96K19 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF170Q96K19 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF170Q96K19 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF170Q96K19 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
RNF170Q96K19 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF170Q96K19 HLA-L-211ENST00000482052 1765 ntBASIC19.9■□□□□ 0.78
RNF170Q96K19 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RNF170Q96K19 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF170Q96K19 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF170Q96K19 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF170Q96K19 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF170Q96K19 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF170Q96K19 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF170Q96K19 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.9■□□□□ 0.78
RNF170Q96K19 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RNF170Q96K19 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF170Q96K19 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF170Q96K19 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF170Q96K19 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF170Q96K19 AC090877.2-201ENST00000558441 1738 ntBASIC19.9■□□□□ 0.78
RNF170Q96K19 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF170Q96K19 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF170Q96K19 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF170Q96K19 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF170Q96K19 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF170Q96K19 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF170Q96K19 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF170Q96K19 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF170Q96K19 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF170Q96K19 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF170Q96K19 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF170Q96K19 AC012354.3-201ENST00000623734 483 ntBASIC19.89■□□□□ 0.77
RNF170Q96K19 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF170Q96K19 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RNF170Q96K19 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.89■□□□□ 0.77
RNF170Q96K19 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF170Q96K19 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF170Q96K19 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF170Q96K19 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.88■□□□□ 0.77
RNF170Q96K19 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF170Q96K19 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF170Q96K19 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF170Q96K19 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF170Q96K19 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF170Q96K19 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF170Q96K19 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RNF170Q96K19 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF170Q96K19 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF170Q96K19 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF170Q96K19 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF170Q96K19 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.87■□□□□ 0.77
RNF170Q96K19 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.87■□□□□ 0.77
RNF170Q96K19 AC019171.1-201ENST00000601251 1056 ntBASIC19.87■□□□□ 0.77
RNF170Q96K19 AC074183.2-201ENST00000623112 922 ntBASIC19.87■□□□□ 0.77
RNF170Q96K19 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RNF170Q96K19 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF170Q96K19 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RNF170Q96K19 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.86■□□□□ 0.77
RNF170Q96K19 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RNF170Q96K19 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF170Q96K19 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF170Q96K19 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF170Q96K19 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF170Q96K19 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF170Q96K19 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RNF170Q96K19 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF170Q96K19 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF170Q96K19 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF170Q96K19 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RNF170Q96K19 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF170Q96K19 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF170Q96K19 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF170Q96K19 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
RNF170Q96K19 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RNF170Q96K19 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RNF170Q96K19 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RNF170Q96K19 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF170Q96K19 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF170Q96K19 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF170Q96K19 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF170Q96K19 AC022616.5-201ENST00000518796 181 ntBASIC19.84■□□□□ 0.77
RNF170Q96K19 AL033527.3-201ENST00000566366 1196 ntBASIC19.84■□□□□ 0.77
RNF170Q96K19 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF170Q96K19 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
RNF170Q96K19 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF170Q96K19 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms