Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TRIM43Q96BQ3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
TRIM43Q96BQ3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
TRIM43Q96BQ3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
TRIM43Q96BQ3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TRIM43Q96BQ3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TRIM43Q96BQ3 RAP2CP1-201ENST00000605103 478 ntBASIC24.9■■□□□ 1.58
TRIM43Q96BQ3 GXYLT1P5-201ENST00000614548 1189 ntBASIC24.9■■□□□ 1.58
TRIM43Q96BQ3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC24.9■■□□□ 1.58
TRIM43Q96BQ3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TRIM43Q96BQ3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.9■■□□□ 1.58
TRIM43Q96BQ3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
TRIM43Q96BQ3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.9■■□□□ 1.58
TRIM43Q96BQ3 SLC6A10P-202ENST00000431994 2058 ntBASIC24.89■■□□□ 1.58
TRIM43Q96BQ3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
TRIM43Q96BQ3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24.89■■□□□ 1.58
TRIM43Q96BQ3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
TRIM43Q96BQ3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
TRIM43Q96BQ3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
TRIM43Q96BQ3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
TRIM43Q96BQ3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC24.89■■□□□ 1.58
TRIM43Q96BQ3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC24.89■■□□□ 1.58
TRIM43Q96BQ3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
TRIM43Q96BQ3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
TRIM43Q96BQ3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.88■■□□□ 1.57
TRIM43Q96BQ3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.88■■□□□ 1.57
TRIM43Q96BQ3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.88■■□□□ 1.57
TRIM43Q96BQ3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.88■■□□□ 1.57
TRIM43Q96BQ3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
TRIM43Q96BQ3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TRIM43Q96BQ3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TRIM43Q96BQ3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TRIM43Q96BQ3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.87■■□□□ 1.57
TRIM43Q96BQ3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.87■■□□□ 1.57
TRIM43Q96BQ3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC24.87■■□□□ 1.57
TRIM43Q96BQ3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TRIM43Q96BQ3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.86■■□□□ 1.57
TRIM43Q96BQ3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TRIM43Q96BQ3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
TRIM43Q96BQ3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
TRIM43Q96BQ3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TRIM43Q96BQ3 AC141586.4-201ENST00000624558 1573 ntBASIC24.86■■□□□ 1.57
TRIM43Q96BQ3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24.86■■□□□ 1.57
TRIM43Q96BQ3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.86■■□□□ 1.57
TRIM43Q96BQ3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TRIM43Q96BQ3 ESRRAP2-201ENST00000418437 1549 ntBASIC24.86■■□□□ 1.57
TRIM43Q96BQ3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
TRIM43Q96BQ3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
TRIM43Q96BQ3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TRIM43Q96BQ3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TRIM43Q96BQ3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
TRIM43Q96BQ3 ABHD17AP1-201ENST00000358206 933 ntBASIC24.85■■□□□ 1.57
TRIM43Q96BQ3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC24.85■■□□□ 1.57
TRIM43Q96BQ3 CDCA4P2-201ENST00000441182 718 ntBASIC24.85■■□□□ 1.57
TRIM43Q96BQ3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC24.85■■□□□ 1.57
TRIM43Q96BQ3 KRT18P61-201ENST00000585825 1298 ntBASIC24.85■■□□□ 1.57
TRIM43Q96BQ3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC24.85■■□□□ 1.57
TRIM43Q96BQ3 MIR6089-201ENST00000616698 64 ntBASIC24.85■■□□□ 1.57
TRIM43Q96BQ3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
TRIM43Q96BQ3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
TRIM43Q96BQ3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.84■■□□□ 1.57
TRIM43Q96BQ3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
TRIM43Q96BQ3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
TRIM43Q96BQ3 AC006015.1-201ENST00000429970 570 ntBASIC24.84■■□□□ 1.57
TRIM43Q96BQ3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.84■■□□□ 1.57
TRIM43Q96BQ3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TRIM43Q96BQ3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC24.84■■□□□ 1.57
TRIM43Q96BQ3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
TRIM43Q96BQ3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC24.83■■□□□ 1.57
TRIM43Q96BQ3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24.83■■□□□ 1.57
TRIM43Q96BQ3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
TRIM43Q96BQ3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.83■■□□□ 1.57
TRIM43Q96BQ3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.83■■□□□ 1.57
TRIM43Q96BQ3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TRIM43Q96BQ3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.83■■□□□ 1.56
TRIM43Q96BQ3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
TRIM43Q96BQ3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.83■■□□□ 1.56
TRIM43Q96BQ3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
TRIM43Q96BQ3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM43Q96BQ3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM43Q96BQ3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM43Q96BQ3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC24.82■■□□□ 1.56
TRIM43Q96BQ3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM43Q96BQ3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM43Q96BQ3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
TRIM43Q96BQ3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TRIM43Q96BQ3 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.81■■□□□ 1.56
TRIM43Q96BQ3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TRIM43Q96BQ3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.81■■□□□ 1.56
TRIM43Q96BQ3 AC010525.1-201ENST00000585559 441 ntBASIC24.81■■□□□ 1.56
TRIM43Q96BQ3 AC073111.5-205ENST00000641717 521 ntBASIC24.81■■□□□ 1.56
TRIM43Q96BQ3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
TRIM43Q96BQ3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
TRIM43Q96BQ3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
TRIM43Q96BQ3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
TRIM43Q96BQ3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
TRIM43Q96BQ3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TRIM43Q96BQ3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TRIM43Q96BQ3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
TRIM43Q96BQ3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms