Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.64■■□□□ 1.05
VPS33AQ96AX1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS33AQ96AX1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS33AQ96AX1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS33AQ96AX1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.64■■□□□ 1.05
VPS33AQ96AX1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS33AQ96AX1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS33AQ96AX1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS33AQ96AX1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.63■■□□□ 1.05
VPS33AQ96AX1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VPS33AQ96AX1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS33AQ96AX1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS33AQ96AX1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VPS33AQ96AX1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.63■■□□□ 1.05
VPS33AQ96AX1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.63■■□□□ 1.05
VPS33AQ96AX1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
VPS33AQ96AX1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS33AQ96AX1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
VPS33AQ96AX1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS33AQ96AX1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
VPS33AQ96AX1 ALDH1A3-203ENST00000557963 1670 ntBASIC21.63■■□□□ 1.05
VPS33AQ96AX1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.62■■□□□ 1.05
VPS33AQ96AX1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
VPS33AQ96AX1 U85056.1-201ENST00000616429 682 ntBASIC21.62■■□□□ 1.05
VPS33AQ96AX1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
VPS33AQ96AX1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.62■■□□□ 1.05
VPS33AQ96AX1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VPS33AQ96AX1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.62■■□□□ 1.05
VPS33AQ96AX1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.62■■□□□ 1.05
VPS33AQ96AX1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.61■■□□□ 1.05
VPS33AQ96AX1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS33AQ96AX1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS33AQ96AX1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
VPS33AQ96AX1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VPS33AQ96AX1 RARRES2P2-201ENST00000394842 485 ntBASIC21.61■■□□□ 1.05
VPS33AQ96AX1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.61■■□□□ 1.05
VPS33AQ96AX1 AC129492.7-201ENST00000622992 756 ntBASIC21.61■■□□□ 1.05
VPS33AQ96AX1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS33AQ96AX1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
VPS33AQ96AX1 GUSBP5-202ENST00000510805 1989 ntBASIC21.61■■□□□ 1.05
VPS33AQ96AX1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VPS33AQ96AX1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS33AQ96AX1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.61■■□□□ 1.05
VPS33AQ96AX1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS33AQ96AX1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS33AQ96AX1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS33AQ96AX1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS33AQ96AX1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.6■■□□□ 1.05
VPS33AQ96AX1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.6■■□□□ 1.05
VPS33AQ96AX1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.6■■□□□ 1.05
VPS33AQ96AX1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VPS33AQ96AX1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
VPS33AQ96AX1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VPS33AQ96AX1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS33AQ96AX1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS33AQ96AX1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
VPS33AQ96AX1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VPS33AQ96AX1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.6■■□□□ 1.05
VPS33AQ96AX1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
VPS33AQ96AX1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS33AQ96AX1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS33AQ96AX1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS33AQ96AX1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS33AQ96AX1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
VPS33AQ96AX1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
VPS33AQ96AX1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
VPS33AQ96AX1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
VPS33AQ96AX1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS33AQ96AX1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS33AQ96AX1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
VPS33AQ96AX1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
VPS33AQ96AX1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
VPS33AQ96AX1 AC011551.1-201ENST00000614101 683 ntBASIC21.59■■□□□ 1.05
VPS33AQ96AX1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
VPS33AQ96AX1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
VPS33AQ96AX1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
VPS33AQ96AX1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
VPS33AQ96AX1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
VPS33AQ96AX1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
VPS33AQ96AX1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS33AQ96AX1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS33AQ96AX1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS33AQ96AX1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS33AQ96AX1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
VPS33AQ96AX1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VPS33AQ96AX1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS33AQ96AX1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS33AQ96AX1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS33AQ96AX1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS33AQ96AX1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.57■■□□□ 1.04
VPS33AQ96AX1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS33AQ96AX1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VPS33AQ96AX1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VPS33AQ96AX1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS33AQ96AX1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.57■■□□□ 1.04
VPS33AQ96AX1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS33AQ96AX1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VPS33AQ96AX1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
VPS33AQ96AX1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VPS33AQ96AX1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms